Marker genes for all cell types and states
Complete marker lists for all 874 SCREATE populations: 34 types, 152 subtypes and 688 states. These are the marker genes supplied in the Cell Browser annotations, without truncation. All rows are included in this HTML page; use your browser’s Find command to locate a name or atlas ID.
Interpretation: marker combinations support, but do not prove, a cell identity or state. They are annotation marker lists, not expression measurements or differential-expression statistics. Consider lineage, tissue context and possible mixed signals; do not infer causality or treatment effects from markers alone. Previously generated annotation rationales and functional descriptions are not included as evidence here.
Atlas IDs identify the exact names in this table (for example, C01-00-01). Type and subtype columns supply the parent context. Browse full annotations.
| Atlas ID | Level | Population | Type (L1) | Subtype (L1S) | All marker genes |
|---|---|---|---|---|---|
| C01 | Type (L1) | adipocyte | — | — | ADIPOQ, PLIN1, FABP4, LPL, LEP |
| C02 | Type (L1) | adipose_stem_and_progenitor_cell | — | — | PDGFRA, COL1A1, DCN, PI16, DPP4 |
| C03 | Type (L1) | astrocyte | — | — | AQP4, SLC1A3, ALDH1L1, SLC1A2, GFAP |
| C04 | Type (L1) | B_cell | — | — | CD79A, MS4A1, CD37, CD74, HLA-DRA |
| C05 | Type (L1) | cardiomyocyte | — | — | TNNT2, ACTC1, MYH6, MYH7, TNNI3 |
| C06 | Type (L1) | chondrocyte | — | — | COL2A1, ACAN, SOX9, COMP, MATN3 |
| C07 | Type (L1) | dendritic_cell | — | — | HLA-DRA, FCER1A, CD1C, CLEC10A, CST3 |
| C08 | Type (L1) | endothelial_cell | — | — | PECAM1, VWF, EMCN, KDR, CDH5 |
| C09 | Type (L1) | epithelial_cell | — | — | EPCAM, KRT8, KRT18, KRT19, CLDN4 |
| C10 | Type (L1) | fibroblast | — | — | COL1A1, COL1A2, DCN, LUM, PDGFRA |
| C11 | Type (L1) | granulocyte | — | — | FCER1G, TYROBP, LST1, ALOX5, GATA2 |
| C12 | Type (L1) | granulosa_cell | — | — | FOXL2, INHA, AMH, CYP19A1, FSHR |
| C13 | Type (L1) | haematopoietic_progenitor_cell | — | — | CD34, KIT, GATA2, PROM1, SPINK2 |
| C14 | Type (L1) | hepatocyte | — | — | ALB, APOA1, TTR, ASGR1, CYP3A4 |
| C15 | Type (L1) | induced_pluripotent_stem_cell | — | — | POU5F1, SOX2, NANOG, LIN28A, DPPA4 |
| C16 | Type (L1) | innate_lymphoid_cell_2 | — | — | GATA3, RORA, IL7R, KLRB1, PTGDR2 |
| C17 | Type (L1) | macrophage | — | — | LST1, CD68, CSF1R, C1QC, APOE |
| C18 | Type (L1) | melanocyte | — | — | PMEL, MLANA, TYR, DCT, MITF |
| C19 | Type (L1) | mesothelial_cell | — | — | MSLN, KRT8, KRT18, KRT19, WT1 |
| C20 | Type (L1) | microglia | — | — | P2RY12, TMEM119, CX3CR1, C1QA, SALL1 |
| C21 | Type (L1) | monocyte | — | — | LST1, CTSS, LILRB1, S100A8, FCN1 |
| C22 | Type (L1) | muscle_stem_cell | — | — | PAX7, MYF5, VCAM1, SPRY1, CDH15 |
| C23 | Type (L1) | natural_killer_cell | — | — | NKG7, GNLY, KLRD1, PRF1, FCGR3A |
| C24 | Type (L1) | neuron | — | — | SNAP25, RBFOX3, SYT1, TUBB3, STMN2 |
| C25 | Type (L1) | oligodendrocyte | — | — | MBP, PLP1, MOG, MAG, MOBP |
| C26 | Type (L1) | oligodendrocyte_precursor_cell | — | — | PDGFRA, CSPG4, OLIG1, OLIG2, SOX10 |
| C27 | Type (L1) | pericyte | — | — | RGS5, PDGFRB, CSPG4, MCAM, NOTCH3 |
| C28 | Type (L1) | plasma_cell | — | — | MZB1, JCHAIN, SDC1, DERL3, IGKC |
| C29 | Type (L1) | platelet | — | — | PPBP, PF4, GP9, ITGA2B, NRGN |
| C30 | Type (L1) | schwann_cell | — | — | S100B, SOX10, MPZ, PLP1, SLC1A3 |
| C31 | Type (L1) | skeletal_muscle_cell | — | — | ACTA1, DES, CKM, MYH1, MYH7 |
| C32 | Type (L1) | smooth_muscle_cell | — | — | ACTA2, TAGLN, MYH11, CNN1, SMTN |
| C33 | Type (L1) | T_cell | — | — | CD3D, CD3E, TRBC1, LCK, IL7R |
| C34 | Type (L1) | thymocyte | — | — | CD3D, CD247, LCK, RAG1, TOX |
| C01-00 | Subtype (L1S) | ADIPO.adipocyte | adipocyte | — | ADIPOQ, PLIN1, FABP4, LPL, CIDEA |
| C02-00 | Subtype (L1S) | ASPC.adipose_stem_and_progenitor_cell | adipose_stem_and_progenitor_cell | — | PDGFRA, COL1A1, DCN, PI16, DPP4 |
| C03-00 | Subtype (L1S) | ASTRO.astrocyte | astrocyte | — | AQP4, SLC1A3, ALDH1L1, SLC1A2, GFAP |
| C04-01 | Subtype (L1S) | B.age_associated | B_cell | — | CD19, CD79A, FCRL5, ITGAX, TBX21 |
| C04-02 | Subtype (L1S) | B.germinal_center | B_cell | — | BCL6, AICDA, RGS13, MEF2B, CD83 |
| C04-03 | Subtype (L1S) | B.memory | B_cell | — | CD27, CD79A, MS4A1, CD37, BANK1 |
| C04-04 | Subtype (L1S) | B.naive | B_cell | — | TCL1A, IGHD, IL4R, FCER2, MS4A1 |
| C05-00 | Subtype (L1S) | CM.cardiomyocyte | cardiomyocyte | — | TNNT2, ACTC1, MYH6, MYH7, TNNI3 |
| C06-00 | Subtype (L1S) | CHOND.chondrocyte | chondrocyte | — | COL2A1, ACAN, SOX9, COMP, MATN3 |
| C07-01 | Subtype (L1S) | DC.cDC1 | dendritic_cell | — | CLEC9A, XCR1, BATF3, CADM1, IRF8 |
| C07-02 | Subtype (L1S) | DC.cDC2 | dendritic_cell | — | CD1C, FCER1A, CLEC10A, CD1E, IRF4 |
| C07-03 | Subtype (L1S) | DC.mig | dendritic_cell | — | CCR7, FSCN1, LAMP3, CCL19, HLA-DRA |
| C07-04 | Subtype (L1S) | DC.pDC | dendritic_cell | — | GZMB, JCHAIN, TCF4, IL3RA, CLEC4C |
| C08-01 | Subtype (L1S) | EC.arterial | endothelial_cell | — | EFNB2, SOX17, GJA5, BMX, HEY1 |
| C08-02 | Subtype (L1S) | EC.capillary | endothelial_cell | — | CA4, RGCC, EMCN, PECAM1, KDR |
| C08-03 | Subtype (L1S) | EC.heart_remodeling | endothelial_cell | — | PECAM1, VWF, KDR, COL15A1, ACKR1 |
| C08-04 | Subtype (L1S) | EC.liver_sinusoidal | endothelial_cell | — | CLEC4G, FCGR2B, STAB2, LYVE1, PECAM1 |
| C08-05 | Subtype (L1S) | EC.lymphatic | endothelial_cell | — | PROX1, PDPN, FLT4, LYVE1, CCL21 |
| C08-06 | Subtype (L1S) | EC.venous | endothelial_cell | — | ACKR1, NR2F2, SELP, VWF, PECAM1 |
| C09-01 | Subtype (L1S) | EPI.alveolar_type_1 | epithelial_cell | — | AGER, PDPN, CAV1, EMP2, HOPX |
| C09-02 | Subtype (L1S) | EPI.alveolar_type_2 | epithelial_cell | — | SFTPC, SFTPA1, SFTPB, ABCA3, NAPSA, LPCAT1 |
| C09-03 | Subtype (L1S) | EPI.bile_duct_cholangiocyte | epithelial_cell | — | KRT19, KRT7, EPCAM, KRT8, KRT18, SOX9 |
| C09-04 | Subtype (L1S) | EPI.cervical_suprabasal | epithelial_cell | — | KRT4, KRT13, CLCA2, SFN, DSG3 |
| C09-05 | Subtype (L1S) | EPI.colonic_enteroendocrine | epithelial_cell | — | CHGA, CHGB, NEUROD1, PAX6, PCSK1, TPH1 |
| C09-06 | Subtype (L1S) | EPI.colonic_tuft | epithelial_cell | — | POU2F3, TRPM5, IL17RB, AVIL, DCLK1 |
| C09-07 | Subtype (L1S) | EPI.colonocyte | epithelial_cell | — | CA1, SLC26A3, KRT20, GUCA2A, FABP1 |
| C09-08 | Subtype (L1S) | EPI.ectocervical_granular | epithelial_cell | — | IVL, TGM1, KRT13, KRT4, GRHL3 |
| C09-09 | Subtype (L1S) | EPI.endocervical_secretory | epithelial_cell | — | MUC5B, MUC5AC, WFDC2, PAX8, KRT8, KRT18 |
| C09-10 | Subtype (L1S) | EPI.esophageal_basal | epithelial_cell | — | KRT5, KRT14, TP63, KRT15, ITGA6 |
| C09-11 | Subtype (L1S) | EPI.esophageal_suprabasal | epithelial_cell | — | KRT4, KRT13, CLCA2, SFN, IVL |
| C09-12 | Subtype (L1S) | EPI.extrahepatic_cholangiocyte | epithelial_cell | — | KRT19, KRT7, CFTR, SLC4A2, MUC1, SOX9 |
| C09-13 | Subtype (L1S) | EPI.gastric_foveolar | epithelial_cell | — | MUC5AC, TFF1, GKN1, GKN2, CLDN18 |
| C09-14 | Subtype (L1S) | EPI.hepatic_ductular_cholangiocyte | epithelial_cell | — | KRT19, KRT7, EPCAM, SOX9, SPP1, TACSTD2 |
| C09-15 | Subtype (L1S) | EPI.ileal_bile_transport | epithelial_cell | — | SLC10A2, FABP6, SLC51A, SLC51B, FGF19, NR1H4 |
| C09-16 | Subtype (L1S) | EPI.ileal_enterocyte_absorptive | epithelial_cell | — | SI, ALPI, FABP1, APOA4, SLC5A1, DPP4 |
| C09-17 | Subtype (L1S) | EPI.ileal_enterocyte_crypt | epithelial_cell | — | OLFM4, SOX9, CD44, KRT19, FABP1 |
| C09-18 | Subtype (L1S) | EPI.ileal_goblet | epithelial_cell | — | MUC2, CLCA1, SPINK4, FCGBP, AGR2, SPDEF |
| C09-19 | Subtype (L1S) | EPI.intrahepatic_cholangiocyte_defense | epithelial_cell | — | KRT19, KRT7, LCN2, DEFB1, SLPI, SPP1 |
| C09-20 | Subtype (L1S) | EPI.intrahepatic_cholangiocyte_transport | epithelial_cell | — | KRT19, KRT7, CFTR, SLC4A2, AQP1, CA2 |
| C09-21 | Subtype (L1S) | EPI.lung_club_secretory | epithelial_cell | — | SCGB1A1, SCGB3A1, CYP2F1, KRT8, KRT19 |
| C09-22 | Subtype (L1S) | EPI.lung_multiciliated | epithelial_cell | — | FOXJ1, TPPP3, PIFO, CCDC153, CETN2, TUBB4B |
| C09-23 | Subtype (L1S) | EPI.pancreatic_acinar | epithelial_cell | — | PRSS1, PRSS2, CPA1, CTRB2, AMY2A, RBPJL |
| C09-24 | Subtype (L1S) | EPI.pancreatic_ductal_bicarbonate | epithelial_cell | — | CFTR, SLC4A4, SLC26A6, CA2, KRT19, KRT8 |
| C09-25 | Subtype (L1S) | EPI.pancreatic_ductal_mucinous | epithelial_cell | — | MUC1, MUC5AC, TFF1, SPINK4, KRT19 |
| C09-26 | Subtype (L1S) | EPI.pancreatic_ductal_perivascular | epithelial_cell | — | KRT19, KRT8, KRT18, MUC1, SPP1 |
| C09-27 | Subtype (L1S) | EPI.pancreatic_ductal_progenitor | epithelial_cell | — | SOX9, EPCAM, KRT19, KRT8, HES1, KRT18 |
| C09-28 | Subtype (L1S) | EPI.pancreatic_islet | epithelial_cell | — | CHGA, CHGB, ISL1, PCSK1, PCSK2, NEUROD1 |
| C09-29 | Subtype (L1S) | EPI.renal_distal_tubule | epithelial_cell | — | SLC12A3, TRPM6, PVALB, CALB1, FXYD2 |
| C09-30 | Subtype (L1S) | EPI.renal_immature_ureteric_bud | epithelial_cell | — | RET, GATA3, PAX2, WNT11, KRT8, KRT19 |
| C09-31 | Subtype (L1S) | EPI.renal_intercalated_cell_type_A | epithelial_cell | — | ATP6V1B1, ATP6V0D2, SLC4A1, CA2, FOXI1, RHCG |
| C09-32 | Subtype (L1S) | EPI.renal_intercalated_cell_type_B | epithelial_cell | — | ATP6V1B1, ATP6V0D2, SLC26A4, CA2, FOXI1 |
| C09-33 | Subtype (L1S) | EPI.renal_principal_cell | epithelial_cell | — | AQP2, AQP3, AVPR2, SCNN1A, SCNN1B, SCNN1G |
| C09-34 | Subtype (L1S) | EPI.renal_proximal_tubule | epithelial_cell | — | LRP2, CUBN, SLC34A1, SLC5A2, ALDOB, AQP1 |
| C09-35 | Subtype (L1S) | EPI.renal_thick_ascending_limb | epithelial_cell | — | SLC12A1, UMOD, KCNJ1, CLDN16, CLDN10, FXYD2 |
| C09-36 | Subtype (L1S) | EPI.salivary_duct_excretory | epithelial_cell | — | KRT19, KRT7, KRT5, KRT14, S100A2 |
| C09-37 | Subtype (L1S) | EPI.salivary_duct_ion_transport | epithelial_cell | — | CFTR, SLC12A2, SLC26A6, ATP1A1, KRT19 |
| C09-38 | Subtype (L1S) | EPI.salivary_intercalated_defense | epithelial_cell | — | KRT19, KRT7, LCN2, SLPI, DEFB1, WFDC2 |
| C09-39 | Subtype (L1S) | EPI.salivary_mucous_acinar | epithelial_cell | — | MUC5B, MUC7, BPIFB2, AGR2, SPDEF |
| C09-40 | Subtype (L1S) | EPI.salivary_myoepithelial | epithelial_cell | — | ACTA2, TAGLN, MYLK, KRT14, KRT5 |
| C09-41 | Subtype (L1S) | EPI.salivary_serous_acinar | epithelial_cell | — | AMY1A, PRB1, PRH1, HTN1, LYZ, AZGP1 |
| C09-42 | Subtype (L1S) | EPI.skin_appendage_keratinocyte | epithelial_cell | — | KRT14, KRT17, KRT19, KRT5, SOX9 |
| C09-43 | Subtype (L1S) | EPI.skin_follicular_keratinizing | epithelial_cell | — | KRT31, KRT33A, KRT35, KRT85, HOXC13, TCHH |
| C09-44 | Subtype (L1S) | EPI.skin_hair_follicle_bulge | epithelial_cell | — | KRT15, KRT19, SOX9, LHX2, CD34, KRT5 |
| C09-45 | Subtype (L1S) | EPI.skin_hair_follicle_companion | epithelial_cell | — | KRT75, KRT6A, KRT6B, KRT16, DSG3 |
| C09-46 | Subtype (L1S) | EPI.skin_interfollicular_spinous | epithelial_cell | — | KRT1, KRT10, DSG1, DSP, SFN, IVL |
| C09-47 | Subtype (L1S) | EPI.skin_keratinocyte_basal | epithelial_cell | — | KRT5, KRT14, TP63, ITGA6, COL17A1, KRT15 |
| C09-48 | Subtype (L1S) | EPI.skin_keratinocyte_progenitor | epithelial_cell | — | KRT15, KRT19, SOX9, TP63, ITGA6 |
| C09-49 | Subtype (L1S) | EPI.skin_keratinocyte_proliferating | epithelial_cell | — | MKI67, TOP2A, PCNA, UBE2C, TYMS, KRT14 |
| C09-50 | Subtype (L1S) | EPI.skin_sebaceous_duct_luminal | epithelial_cell | — | KRT79, GATA6, KRT17, KRT6A, KRT19 |
| C09-51 | Subtype (L1S) | EPI.skin_sweat_duct_keratinocyte | epithelial_cell | — | KRT77, KRT19, KRT8, CFTR, SLC12A2 |
| C09-52 | Subtype (L1S) | EPI.thymic_cortical | epithelial_cell | — | FOXN1, PSMB11, PRSS16, DLL4, KRT8, CCL25 |
| C09-53 | Subtype (L1S) | EPI.thymic_medullary | epithelial_cell | — | AIRE, FEZF2, KRT5, KRT14, CLDN4, TRAF6 |
| C09-54 | Subtype (L1S) | EPI.tracheal_basal | epithelial_cell | — | KRT5, KRT14, TP63, KRT15, KRT17, ITGA6 |
| C09-55 | Subtype (L1S) | EPI.tracheal_submucosal_gland | epithelial_cell | — | MUC5B, LYZ, LTF, KRT19, KRT8, SCGB3A1 |
| C09-56 | Subtype (L1S) | EPI.tracheal_suprabasal | epithelial_cell | — | KRT4, KRT13, KRT19, CLCA2, SFN, KRT16 |
| C10-01 | Subtype (L1S) | FIB.adventitial | fibroblast | — | PI16, DPP4, COL1A1, DCN, CFD |
| C10-02 | Subtype (L1S) | FIB.barrier_purinergic | fibroblast | — | COL1A1, DCN, LUM, ENTPD1, NT5E |
| C10-03 | Subtype (L1S) | FIB.barrier_secretory | fibroblast | — | COL1A1, DCN, LUM, WNT2B, RSPO3 |
| C10-04 | Subtype (L1S) | FIB.hepatic_stellate_cell | fibroblast | — | RGS5, COL1A1, DES, LRAT, RBP1 |
| C10-05 | Subtype (L1S) | FIB.interstitial | fibroblast | — | COL1A1, COL1A2, DCN, LUM, PDGFRA |
| C10-06 | Subtype (L1S) | FIB.lung_alveolar | fibroblast | — | COL1A1, DCN, WNT2, TCF21, NPNT |
| C10-07 | Subtype (L1S) | FIB.neurolectin_mucosa | fibroblast | — | COL1A1, DCN, LUM, SEMA3C, NRG1 |
| C10-08 | Subtype (L1S) | FIB.perivascular_interface | fibroblast | — | COL1A1, COL4A1, RGS5, PDGFRB, CSPG4 |
| C10-09 | Subtype (L1S) | FIB.reticular | fibroblast | — | COL3A1, COL1A1, C7, CCL19, CXCL12 |
| C10-10 | Subtype (L1S) | FIB.skin_neurosecretory | fibroblast | — | COL1A1, DCN, SFRP2, NGF, NRG1 |
| C10-11 | Subtype (L1S) | FIB.skin_papillary | fibroblast | — | COL1A1, COL3A1, APCDD1, COL18A1, WIF1 |
| C10-12 | Subtype (L1S) | FIB.skin_sheath | fibroblast | — | COL1A1, COL3A1, COL6A1, TNC, SFRP4 |
| C10-13 | Subtype (L1S) | FIB.skin_tenogenic | fibroblast | — | SCX, TNMD, COL1A1, COL1A2, MKX |
| C10-14 | Subtype (L1S) | FIB.suburothelial | fibroblast | — | COL1A1, DCN, LUM, WNT2B, BMP4 |
| C10-15 | Subtype (L1S) | FIB.tracheal_subepithelial | fibroblast | — | COL1A1, DCN, WNT2, RSPO3, PDGFRA |
| C10-16 | Subtype (L1S) | FIB.transitioning | fibroblast | — | COL1A1, DCN, TAGLN, ACTA2, TNC |
| C11-01 | Subtype (L1S) | GRANU.MAST | granulocyte | — | KIT, TPSAB1, TPSB2, MS4A2, HDC |
| C11-02 | Subtype (L1S) | GRANU.neutrophil | granulocyte | — | CSF3R, FCGR3B, S100A8, S100A9, FPR1 |
| C12-00 | Subtype (L1S) | GRNLSA.granulosa_cell | granulosa_cell | — | FOXL2, INHA, AMH, CYP19A1, FSHR |
| C13-00 | Subtype (L1S) | HPC.haematopoietic_progenitor_cell | haematopoietic_progenitor_cell | — | CD34, KIT, GATA2, PROM1, SPINK2 |
| C14-01 | Subtype (L1S) | HEP.acute_phase | hepatocyte | — | ALB, CRP, SAA1, HP, FGA |
| C14-02 | Subtype (L1S) | HEP.canalicular_transport | hepatocyte | — | ABCB11, ABCB4, ABCC2, ATP8B1, ALB |
| C14-03 | Subtype (L1S) | HEP.pericentral_lipoprotein | hepatocyte | — | GLUL, CYP2E1, APOB, APOE, CYP3A4 |
| C14-04 | Subtype (L1S) | HEP.periportal_metabolic | hepatocyte | — | CPS1, ASS1, PCK1, HAL, ALB |
| C15-00 | Subtype (L1S) | IPSC.induced_pluripotent_stem_cell | induced_pluripotent_stem_cell | — | POU5F1, SOX2, NANOG, LIN28A, DPPA4 |
| C16-00 | Subtype (L1S) | ILC2.innate_lymphoid_cell_2 | innate_lymphoid_cell_2 | — | GATA3, RORA, IL7R, KLRB1, PTGDR2 |
| C17-01 | Subtype (L1S) | MAC.alveolar | macrophage | — | PPARG, FABP4, MARCO, INHBA, CSF2RB |
| C17-02 | Subtype (L1S) | MAC.kupffer | macrophage | — | CLEC4F, TIMD4, VSIG4, MARCO, CD5L |
| C17-03 | Subtype (L1S) | MAC.LAM | macrophage | — | LIPA, TREM2, APOE, GPNMB, LGALS3 |
| C17-04 | Subtype (L1S) | MAC.MDM | macrophage | — | LST1, FCN1, CTSS, CD68, CSF1R |
| C17-05 | Subtype (L1S) | MAC.microglia_like | macrophage | — | P2RY12, CX3CR1, C1QA, TREM2, APOE |
| C17-06 | Subtype (L1S) | MAC.proliferating | macrophage | — | MKI67, TOP2A, TYMS, CD68, CSF1R |
| C17-07 | Subtype (L1S) | MAC.resident_cardiac | macrophage | — | C1QC, LYVE1, FOLR2, MRC1, CD163 |
| C17-08 | Subtype (L1S) | MAC.resident_iron | macrophage | — | CD163, HMOX1, FTH1, FTL, SLC40A1 |
| C17-09 | Subtype (L1S) | MAC.resident_repair | macrophage | — | MRC1, FOLR2, LYVE1, C1QC, IGF1 |
| C18-00 | Subtype (L1S) | MEL.melanocyte | melanocyte | — | PMEL, MLANA, TYR, DCT, MITF |
| C19-00 | Subtype (L1S) | MESO.mesothelial_cell | mesothelial_cell | — | MSLN, KRT8, KRT18, KRT19, WT1 |
| C20-00 | Subtype (L1S) | MG.microglia | microglia | — | P2RY12, TMEM119, CX3CR1, C1QA, SALL1 |
| C21-01 | Subtype (L1S) | MONO.CD14 | monocyte | — | S100A8, S100A9, LILRB1, CTSS, FCN1 |
| C21-02 | Subtype (L1S) | MONO.CD16 | monocyte | — | FCGR3A, LST1, IFITM3, LILRB1, MS4A7 |
| C22-00 | Subtype (L1S) | MUSC.muscle_stem_cell | muscle_stem_cell | — | PAX7, MYF5, VCAM1, SPRY1, CDH15 |
| C23-00 | Subtype (L1S) | NK.natural_killer_cell | natural_killer_cell | — | NKG7, GNLY, KLRD1, PRF1, FCGR3A |
| C24-01 | Subtype (L1S) | NEU.EXC_CT | neuron | — | SLC17A7, SATB2, TLE4, BCL11B, SNAP25 |
| C24-02 | Subtype (L1S) | NEU.EXC_IT | neuron | — | SLC17A7, SATB2, CUX1, CUX2, SNAP25 |
| C24-03 | Subtype (L1S) | NEU.EXC_NTNG1 | neuron | — | SLC17A7, NTNG1, SATB2, SYT1, SNAP25 |
| C24-04 | Subtype (L1S) | NEU.EXC_SYT2 | neuron | — | SLC17A7, SYT2, SNAP25, RORB, GRIA2 |
| C24-05 | Subtype (L1S) | NEU.INH_LAMP5 | neuron | — | GAD1, GAD2, LAMP5, RELN, LHX1 |
| C24-06 | Subtype (L1S) | NEU.INH_PVALB | neuron | — | GAD1, GAD2, PVALB, KCNC1, ERBB4 |
| C24-07 | Subtype (L1S) | NEU.INH_VIP | neuron | — | GAD1, GAD2, VIP, CRH, RELN |
| C25-00 | Subtype (L1S) | OLG.oligodendrocyte | oligodendrocyte | — | MBP, PLP1, MOG, MAG, MOBP |
| C26-00 | Subtype (L1S) | OPC.oligodendrocyte_precursor_cell | oligodendrocyte_precursor_cell | — | PDGFRA, CSPG4, OLIG1, OLIG2, SOX10 |
| C27-00 | Subtype (L1S) | PERI.pericyte | pericyte | — | RGS5, PDGFRB, CSPG4, MCAM, NOTCH3 |
| C28-01 | Subtype (L1S) | PC.IgA_muocsal | plasma_cell | — | JCHAIN, MZB1, IGHA1, IGHA2, SDC1 |
| C28-02 | Subtype (L1S) | PC.IgG_systemic | plasma_cell | — | MZB1, JCHAIN, IGHG1, IGHG3, SDC1 |
| C29-00 | Subtype (L1S) | PLAT.platelet | platelet | — | PPBP, PF4, GP9, ITGA2B, NRGN |
| C30-00 | Subtype (L1S) | SCHWN.schwann_cell | schwann_cell | — | S100B, SOX10, MPZ, PLP1, SLC1A3 |
| C31-01 | Subtype (L1S) | SKM.type_1_slow | skeletal_muscle_cell | — | MYH7, TNNT1, TPM3, CKM, PPARGC1A |
| C31-02 | Subtype (L1S) | SKM.type_2_fast | skeletal_muscle_cell | — | MYH1, MYH2, TNNT3, CKM, ACTA1 |
| C32-00 | Subtype (L1S) | SMC.smooth_muscle_cell | smooth_muscle_cell | — | ACTA2, TAGLN, MYH11, CNN1, SMTN |
| C33-01 | Subtype (L1S) | T.CD4_cytotoxic | T_cell | — | NKG7, CCL5, GZMB, PRF1, CTSW |
| C33-02 | Subtype (L1S) | T.CD4_naive | T_cell | — | CCR7, SELL, TCF7, LEF1, MAL |
| C33-03 | Subtype (L1S) | T.CD4_Tcm | T_cell | — | CCR7, IL7R, LTB, MAL, TCF7 |
| C33-04 | Subtype (L1S) | T.CD4_Tem | T_cell | — | IL7R, GZMK, LTB, KLRB1, CCL5 |
| C33-05 | Subtype (L1S) | T.CD4_Tfh | T_cell | — | CXCR5, PDCD1, ICOS, BCL6, IL21 |
| C33-06 | Subtype (L1S) | T.CD4_Th17 | T_cell | — | KLRB1, RORA, CCR6, IL7R, IL23R |
| C33-07 | Subtype (L1S) | T.CD4_Th2 | T_cell | — | GATA3, IL7R, PTGDR2, CCR4, IL1RL1 |
| C33-08 | Subtype (L1S) | T.CD4_transitional | T_cell | — | IL7R, CCR7, LTB, GZMK, MAL |
| C33-09 | Subtype (L1S) | T.CD4_Treg | T_cell | — | FOXP3, IL2RA, CTLA4, TIGIT, IKZF2 |
| C33-10 | Subtype (L1S) | T.CD4_Trm | T_cell | — | CD69, ITGAE, CXCR6, IL7R, ZNF683 |
| C33-11 | Subtype (L1S) | T.CD8_naive | T_cell | — | CCR7, SELL, TCF7, LEF1, IL7R |
| C33-12 | Subtype (L1S) | T.CD8_Tcm | T_cell | — | CCR7, IL7R, TCF7, LTB, GZMK |
| C33-13 | Subtype (L1S) | T.CD8_Tem | T_cell | — | CCL5, NKG7, GZMK, CTSW, KLRD1 |
| C33-14 | Subtype (L1S) | T.CD8_transitional | T_cell | — | IL7R, GZMK, LTB, CD55, KLRD1 |
| C33-15 | Subtype (L1S) | T.CD8_Trm | T_cell | — | CD69, ITGAE, CXCR6, CCL5, ZNF683 |
| C33-16 | Subtype (L1S) | T.gamma_delta | T_cell | — | TRDC, TRGC1, CD3D, KLRD1, CCL5 |
| C33-17 | Subtype (L1S) | T.MAIT | T_cell | — | KLRB1, SLC4A10, RORA, ZBTB16, TRAV1-2 |
| C34-00 | Subtype (L1S) | THYMO.thymocyte | thymocyte | — | CD3D, CD247, LCK, RAG1, TOX |
| C01-00-01 | State (L2) | ADIPO.hypoxia_remodellingAlternate spelling: ADIPO.hypoxia_remodeling | adipocyte | ADIPO.adipocyte | ABCC3, AMY2B, GPAM, HILPDA, HOXB8, LINC01230, LINC01632, RETSAT, RNPC3, TNS1 |
| C01-00-02 | State (L2) | ADIPO.immature | adipocyte | ADIPO.adipocyte | AZI2, CDC37L1, MBNL2, MYLIP, NBPF14, NRIP1, PGM3, PSMD8, STX12, WDPCP |
| C01-00-03 | State (L2) | ADIPO.inflammatory | adipocyte | ADIPO.adipocyte | ANGPTL4, EMP1, IFITM3, LMNA, MAFF, MYC, NAMPT, S100A10, SOCS3, STK17A |
| C01-00-04 | State (L2) | ADIPO.thermogenic | adipocyte | ADIPO.adipocyte | ABCA8, CIDEA, DIO3OS, IFI44L, LAMC1, OAS1, PDK4, RHOBTB3, RSPO3, WDR86 |
| C02-00-01 | State (L2) | ASPC.activated | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | ATF3, BAG3, CDKN1A, DDX5, DNAJA1, DNAJB1, EGR1, FOS, FOSB, HSP90AA1, HSP90AB1, HSPA8, HSPH1, JUN, JUNB, KLF4, MAFF |
| C02-00-02 | State (L2) | ASPC.adipocyte_capillary_interface | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | APOC1, APOE, BGN, COL4A1, COL4A2, FKBP1A, HES4, LMO4, THBS4, TPM2 |
| C02-00-03 | State (L2) | ASPC.baseline | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | ASPN, C1QTNF3, CD55, MFAP5, PCOLCE2, PI16, SMOC2, VEGFD |
| C02-00-04 | State (L2) | ASPC.inflammatory | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | CCL2, CXCL1, CXCL10, CXCL2, CXCL3, GBP1, ICAM1, IL32, MT1A, MT1M, MT1X, MT2A, NNMT, PLAU, PTX3, SOD2, TNFAIP6 |
| C02-00-05 | State (L2) | ASPC.mesothelial_like | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | ABCA10, ADAMTSL3, ARHGEF28, CCDC102B, FBXL7, GOLGA8A, IFI44L, LAMA2, LINC01798, NFASC, PDZRN3, PTEN, RSAD2, WT1 |
| C02-00-06 | State (L2) | ASPC.niche_keeping_progenitor | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | ALDH1A1, CFH, FBLN1, GGT5, IFITM1, IGFBP7, ITM2A, LTBP4, MYOC, OSR1, PTCH2, TFPI, TSPAN8, FOXS1, HHIP, HHIP-AS1, SUCNR1 |
| C02-00-07 | State (L2) | ASPC.preadipocyte_lipid_primed | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | MMP28, CD36, SRPX, FABP5, AKR1C1, TSPAN15, HSPB6, FABP4, CXCL14, MEST, MRPS6, RASD1 |
| C02-00-08 | State (L2) | ASPC.proliferative | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | BIRC5, GAP43, NUSAP1, PCLAF, PRC1, PTTG1, RRM2, S100A16, SH3BGRL3, STMN1, TK1, TUBA1C, TYMS, UBE2C, UBE2T |
| C02-00-09 | State (L2) | ASPC.remodeling | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | APOC1, AQP3, COL3A1, CYP1B1, FN1, LMO4, LXN, PENK, POSTN, RAB13, RARRES1, TIMP1, TPM2, TUBB3 |
| C02-00-10 | State (L2) | ASPC.secretory | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | C3, DIO3OS, FXYD1, LAMB2, PLAC9, USP19 |
| C02-00-11 | State (L2) | ASPC.signal_integrator | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | ABL1, AGAP1, ANK2, ATP13A3, CBLB, ESYT2, GOLGA8A, HIPK2, ITPKC, MIR222HG, NFATC1, NFATC2, PAQR3, PLEKHM2, TSC22D2, WNT9A, ZSWIM6 |
| C02-00-12 | State (L2) | ASPC.stem_like_progenitor | adipose_stem_and_progenitor_cell | ASPC.adipose_stem_and_progenitor_cell | C1QTNF3, CD55, CD70, CLEC3B, DACT2, DEFB1, DKK1, EFHD1, FABP3, MFAP5, NTM, PCOLCE2, PROCR, WNT10B |
| C03-00-01 | State (L2) | ASTRO.A1_reactive | astrocyte | ASTRO.astrocyte | ABI3BP, ADAMTSL3, AQP1, C3, CD44, KAZN, LINC00609, NFASC, SLC24A4, VCAN |
| C03-00-02 | State (L2) | ASTRO.A2_reactive | astrocyte | ASTRO.astrocyte | ARHGAP29, BAALC-AS1, CHI3L1, COLEC12, F3, GNA14, HAP1, NRP1, SAMD4A, TPST1 |
| C03-00-03 | State (L2) | ASTRO.homeostatic | astrocyte | ASTRO.astrocyte | CPE, FAM171B, GJB6, GPM6A, GPR37L1, HTRA1, SLC1A2, SLC1A4, TSPAN7, TTYH1 |
| C03-00-04 | State (L2) | ASTRO.hypoxia_angiogenic | astrocyte | ASTRO.astrocyte | ANGPTL4, C15orf62, GZMM, HILPDA, KCNJ14, LINC01828, LINC02169, MIR194-2HG, MT1HL1, VEGFA |
| C03-00-05 | State (L2) | ASTRO.immature_lipid | astrocyte | ASTRO.astrocyte | BLM, FABP7, GRIA1, HMGCS1, LINC01411, MSMO1, MT1H, SEMA6A, SMYD2, VWCE |
| C03-00-06 | State (L2) | ASTRO.neuromodulatory | astrocyte | ASTRO.astrocyte | AOC2, CCDC141, EQTN, FOXD4L4, LCNL1, LINC00342, LINC00632, NOS1, PILRA, SPATA45 |
| C03-00-07 | State (L2) | ASTRO.stress_acute | astrocyte | ASTRO.astrocyte | CRYAB, FOS, HSPA1A, HSPA1B, HSPB8, IRF2BP2, LINC01094, PPP1R15A, PRKAG2, UBC |
| C03-00-08 | State (L2) | ASTRO.stress_mito | astrocyte | ASTRO.astrocyte | MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L |
| C03-00-09 | State (L2) | ASTRO.synaptic_interaction | astrocyte | ASTRO.astrocyte | ADGRV1, BCYRN1, GOLGA8B, GRIA2, LCNL1, NPIPB13, PLEKHH2, SAT1, SON, SYNE1 |
| C04-01-01 | State (L2) | B.age_associated.activated | B_cell | B.age_associated | CD72, CD83, CREM, DUSP2, FCRL5, NR4A1, NR4A2, NR4A3, SH3BP2, SREBF2, SRGN, TUBB2A, TXNDC5, ZNF331 |
| C04-01-02 | State (L2) | B.age_associated.migratory | B_cell | B.age_associated | ANXA2, ARPC1B, CAPZB, CD82, CIB1, COTL1, CRIP1, GAPDH, ITGB7, LSP1, SH3BGRL3, SUB1, TAGLN2, UCP2 |
| C04-01-03 | State (L2) | B.age_associated.naive_transitional | B_cell | B.age_associated | BACH2, CD55, CR2, FCER2, FOXP1, FXYD7, MCTP2, PCDH9, RUBCNL, TCL1A, TSPAN13, VPREB3 |
| C04-02-01 | State (L2) | B.germinal_center.DZ_M_phase | B_cell | B.germinal_center | ASPM, AURKB, CDC20, CDCA3, CDCA8, CDK1, CENPF, DLGAP5, GTSE1, KIF23, KNSTRN, NUSAP1, PLK1, SGO2, TOP2A, UBE2C |
| C04-02-02 | State (L2) | B.germinal_center.DZ_S_phase | B_cell | B.germinal_center | CDT1, DCTPP1, DHFR, DUT, GINS2, MCM3, MCM34, MCM5, MCM7, MSH6, PCNA, POLE3, RANBP1, RFC2, RFC4, RNASEH2A, SLBP, UNG |
| C04-02-03 | State (L2) | B.germinal_center.LZ_memory_precursor | B_cell | B.germinal_center | ACP5, AHNAK, ANXA4, CAPG, CD1C, CD82, FCER2, FCMR, IFITM2, IL2RG, MTSS1, S1PR1, SELL, TXNIP |
| C04-02-04 | State (L2) | B.germinal_center.LZ_selection | B_cell | B.germinal_center | BTNL9, CAMK1, CD74, LCK, LINC02099, MAML3, MCTP2, MS4A1, P2RY12, PEA15, PRPSAP2, PTAFR, RASL11A, SERPINA9 |
| C04-02-05 | State (L2) | B.germinal_center.LZ_survival | B_cell | B.germinal_center | C16orf74, CASD1, CHST15, COL9A3, FAM167A, FOXP1, GABARAPL1, GNB4, JSRP1, LINC02397, LTB, MBNL2, PLEKHG1, SLC2A5, TGIF1 |
| C04-03-01 | State (L2) | B.memory.activated | B_cell | B.memory | BAG3, CXCR4, DNAJB1, DUSP1, FOS, GADD45B, HSPA1A, HSPA1B, HSPH1, JUN, RHOB |
| C04-03-02 | State (L2) | B.memory.baseline | B_cell | B.memory | AIM2, CD27, FCRL2, GPR183, LINC01781, S100A6, TNFRSF13B, VIM |
| C04-03-03 | State (L2) | B.memory.migratory | B_cell | B.memory | ADK, ANXA2, ANXA4, BIN2, CAPZB, COCH, CPNE5, CRIP1, CRIP2, EBI3, FUT7, GCSAM, GRAMD1C, GSN, GSTK1, HIPK2, HOMER3, HOPX, ITGB1, LYPLAL1, PDE4D, PIK3R5, RNASEK, S100A10, TKT |
| C04-03-04 | State (L2) | B.memory.pDC_imprint | B_cell | B.memory | APBB1IP, CD1C, FCRL2, HCK, KLK1, LILRA4, PLAC8, PLD4, PPP1R14A, RNASEK, SYK |
| C04-03-05 | State (L2) | B.memory.preactivated | B_cell | B.memory | BCL2A1, CCL4, CCR7, CD83, CDKN1A, CXCR4, MIR155HG, MYC, NFKBID, NR4A1, NR4A2, NR4A3, PIM3 |
| C04-04-01 | State (L2) | B.naive.activated | B_cell | B.naive | ATF3, CD69, CITED2, DDIT3, DNAJB1, DUSP1, EGR1, FOS, FOSB, GADD45B, HEXIM1, HSPA1A, HSPA1B, JUN, JUNB, RHOB, SNAI1, TNF |
| C04-04-02 | State (L2) | B.naive.antigen_presenting_ready | B_cell | B.naive | SYS1 |
| C04-04-03 | State (L2) | B.naive.baseline | B_cell | B.naive | BACH2, BTLA, FCER2, FCRL1, FOXO1, HVCN1, IL4R, TCL1A |
| C04-04-04 | State (L2) | B.naive.metabolic | B_cell | B.naive | DNPH1, EBI3, FABP5, NME1, NME2, PKM, PSME2, SRM, TXN |
| C04-04-05 | State (L2) | B.naive.proteostasis | B_cell | B.naive | UBE2F |
| C04-04-06 | State (L2) | B.naive.purinergic | B_cell | B.naive | P2RX5 |
| C04-04-07 | State (L2) | B.naive.receptor_recycle | B_cell | B.naive | RNASEK |
| C04-04-08 | State (L2) | B.naive.remodeling | B_cell | B.naive | CHKB |
| C04-04-09 | State (L2) | B.naive.restrained | B_cell | B.naive | ADGRE5, ATP1B3, BCL2A1, CD55, CD83, CDKN1A, CREM, CRIP1, CYSTM1, ELF1, EMP3, EZR, HES4, HSPD1, HSPE1, HSPH1, KDM6B, LMNA, LY9, MYADM, NFKBID, NINJ1, NR4A1, NR4A2, NR4A3, SELENOK, SQSTM1, SRGN, TNFAIP3, USP36, VPS37B, YPEL5 |
| C05-00-01 | State (L2) | CM.anti_inflammatory | cardiomyocyte | CM.cardiomyocyte | LINC01118, SOCS5 |
| C05-00-02 | State (L2) | CM.baseline | cardiomyocyte | CM.cardiomyocyte | MYBPC3, PLN, TNNI3, TNNT2, TTN |
| C05-00-03 | State (L2) | CM.contractile_oxphos | cardiomyocyte | CM.cardiomyocyte | ACTC1, ALDOA, CKM, COX4I1, COX6B1, DES, EEF1A2, FTH1, GAPDH, HRC, HSPB6, LDHB, MB, MT-ATP6, MT-ATP8, MT-CO1, MT-CO3, MT-CYB, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MYH7, MYL3, NDUFA4, RPL13, RPL4, RPL8, RPLP1, S100A1, SLC25A4, TCAP, TNNC1, TPM1, TPT1 |
| C05-00-04 | State (L2) | CM.inflammatory | cardiomyocyte | CM.cardiomyocyte | CCL2, GADD45B, HAMP, LINC00513, MAFF, SGMS2, SOCS3, TNFRSF11B, XIRP1, ZFP36 |
| C05-00-05 | State (L2) | CM.mechano_activated | cardiomyocyte | CM.cardiomyocyte | ABRA, ADAMTS1, ANKRD1, ATF3, BTG2, FOS, LMOD2, MYL12A, NR4A1, NR4A3 |
| C05-00-06 | State (L2) | CM.mito_proteostasis | cardiomyocyte | CM.cardiomyocyte | DNAJC25, DNAJC25-GNG10, FASTKD5, UBOX5 |
| C05-00-07 | State (L2) | CM.osmoprotection | cardiomyocyte | CM.cardiomyocyte | MRPS6, SLC5A3 |
| C05-00-08 | State (L2) | CM.oxidative_phospho | cardiomyocyte | CM.cardiomyocyte | NDUFC2, NDUFC2-KCTD14 |
| C05-00-09 | State (L2) | CM.sarcomere_actin_interface | cardiomyocyte | CM.cardiomyocyte | RFLNA, ZNF664 |
| C05-00-10 | State (L2) | CM.translation_boost_RPL | cardiomyocyte | CM.cardiomyocyte | RPL17 |
| C05-00-11 | State (L2) | CM.translation_boost_RPS | cardiomyocyte | CM.cardiomyocyte | RPS10 |
| C06-00-01 | State (L2) | CHOND.activated_fibro_like | chondrocyte | CHOND.chondrocyte | ABRACL, IFITM2, IFITM3, LGALS1, LY6E, NME4, S100A4, TPM4, TUBB |
| C06-00-02 | State (L2) | CHOND.angiogenic | chondrocyte | CHOND.chondrocyte | ARHGAP6, BASP1, BDKRB1, CCBE1, HAS1, PTGES, SEMA3C, TREM1 |
| C06-00-03 | State (L2) | CHOND.articular_collagen | chondrocyte | CHOND.chondrocyte | CFH, CHAD, COL9A2, COL9A3, FRZB, HMGA1, KCNMA1, P3H2, RHOC, S100A1 |
| C06-00-04 | State (L2) | CHOND.pro_inflammatory | chondrocyte | CHOND.chondrocyte | BCL2A1, C15orf48, CCL20, CXCL8, CYBA, FCMR, HSD11B1, PILRA, SQOR, TNFAIP8 |
| C06-00-05 | State (L2) | CHOND.remodeling | chondrocyte | CHOND.chondrocyte | HS3ST1, LOXL2, PMEPA1, SERPINE1, TSPAN2 |
| C07-01-01 | State (L2) | DC.cDC1.activated | dendritic_cell | DC.cDC1 | AREG, CD83, CSRNP1, DNAJB1, DNAJB9, DUSP2, NR4A1, NR4A2, PLAUR, PPP1R15A, RASGEF1B, RNASE6, SELENOK, SGK1, SLC2A3, TACSTD2, ZFP36, ZNF331 |
| C07-01-02 | State (L2) | DC.cDC1.baseline | dendritic_cell | DC.cDC1 | BATF3, CADM1, CLEC9A, DNASE1L3, IDO1, IRF8, THBD, XCR1 |
| C07-01-03 | State (L2) | DC.cDC1.cross_presenting | dendritic_cell | DC.cDC1 | CADM1, CCND1, DNASE1L3, FKBP1B, FUCA1, IDO1, MPEG1, NAAA, SDC2, XCR1 |
| C07-01-04 | State (L2) | DC.cDC1.homeostatic_inhibitory | dendritic_cell | DC.cDC1 | ABI3, APEX1, CARD16, CD300A, CORO1A, HNRNPD, KLF13, LMO2, LRRC25, LTA4H, MRPL23, NREP, PLD4, SAMHD1, SELL, ST14, TGFBI, TKT |
| C07-01-05 | State (L2) | DC.cDC1.proliferative | dendritic_cell | DC.cDC1 | AURKB, BIRC5, CDCA3, CDK1, CDKN3, CENPF, CENPM, CENPW, CKS1B, HMGB2, HMGN2, MAD2L1, PCLAF, PLK1, RRM2, STMN1, TUBB, UBE2C, ZWINT |
| C07-02-01 | State (L2) | DC.cDC2.adhesion_signaling | dendritic_cell | DC.cDC2 | C12orf75, CCND3, ENHO, FBLN2, ICAM3, ITGB7, ITM2C, NREP, PLD4, PPP1R14A, RIPOR2, SELL, SIGLEC6, SYTL1, TBC1D10C, UNC119, UPK3A, VIPR1 |
| C07-02-02 | State (L2) | DC.cDC2.antiviral | dendritic_cell | DC.cDC2 | IFITM1, LY6E, PLEKHO1, PSME2, STAT1, UBE2L6 |
| C07-02-03 | State (L2) | DC.cDC2.lipid_metabolic | dendritic_cell | DC.cDC2 | APOC1, FABP3, FABP4, FABP5, PPARG, TAGLN |
| C07-02-04 | State (L2) | DC.cDC2.migratory | dendritic_cell | DC.cDC2 | AHNAK, CAPN2, CRIP2, EZR, GAS2L1, LMNA, MTMR11, MYADM, NRGN, SLC35E4, SLCO3A1, STX2, TPPP3, TREM1, TRNP1 |
| C07-02-05 | State (L2) | DC.cDC2.monocyte_like | dendritic_cell | DC.cDC2 | AGTRAP, BST1, CD14, CD163, CD36, CSTA, FCN1, GIMAP7, MGST1, PADI4, RETN, RNASE2, S100A12, S100A8, S100A9, SLC11A1, VCAN |
| C07-02-06 | State (L2) | DC.cDC2.pro_inflammatory | dendritic_cell | DC.cDC2 | BCL2A1, BIRC3, CCR7, CXCL2, CXCL3, CXCL8, G0S2, ICAM1, IER3, IL1A, IL1B, IL1R2, MIR155HG, NFKBIA, PLAUR, ZC3H12A |
| C07-02-07 | State (L2) | DC.cDC2.proliferative | dendritic_cell | DC.cDC2 | BIRC5, CDK1, CDKN3, CENPK, CENPM, CENPU, CKS1B, MAD2L1, MKI67, NUSAP1, PCLAF, PKMYT1, RRM2, STMN1, TK1, TUBB, TYMS, ZWINT |
| C07-02-08 | State (L2) | DC.cDC2.tolerogenic_regulatory | dendritic_cell | DC.cDC2 | ARL4A, ATF3, CXCL16, DNAJB1, FCER1A, FCGR2B, HSPA1A, HSPA1B, NR4A1, NR4A2, PAPSS2, RGS2, SGK1, VSIG4, ZNF331 |
| C07-03-01 | State (L2) | DC.mig.baseline | dendritic_cell | DC.mig | BIRC3, CCL17, CCL19, CCL22, CCR7, CD274, CXCR4, DUSP1, FSCN1, IDO1, IRF4, LAMP3, LTB, MARCKSL1, NFKBIA, PDCD1LG2, RELB, S1PR1 |
| C07-04-01 | State (L2) | DC.pDC.baseline | dendritic_cell | DC.pDC | CLEC4C, GZMB, IL3RA, IRF7, IRF8, SPIB, TCF4, TLR7, TLR9 |
| C07-04-02 | State (L2) | DC.pDC.immature_metabolic | dendritic_cell | DC.pDC | LCNL1, PTGDS, TCL1A, WNT10A |
| C07-04-03 | State (L2) | DC.pDC.poised_migratory | dendritic_cell | DC.pDC | ATF3, CDKN1A, CXCR4, EZR, GPR183, ISCA1, JUNB, KLF4, NR4A3, PIM2, RGS2, ZNF331 |
| C08-01-01 | State (L2) | EC.arterial.angiogenic_tip | endothelial_cell | EC.arterial | COL4A1, COL4A2, CTHRC1, FSCN1, LAMA4, NRP2, PGF, SNTB1, THY1 |
| C08-01-02 | State (L2) | EC.arterial.arteriole_gas_exchange | endothelial_cell | EC.arterial | CA4, CLIC5, COL4A1, DOCK4, EPB41L2, HIF3A, ITGA1, MGLL, NRP1, RGCC, VWF |
| C08-01-03 | State (L2) | EC.arterial.arteriole_interface | endothelial_cell | EC.arterial | ACKR1, CALCRL, FLRT2, IGFBP5, PLVAP, PRCP, PRICKLE4, RAMP3, RASA4 |
| C08-01-04 | State (L2) | EC.arterial.elastic | endothelial_cell | EC.arterial | ABI3BP, BGN, BMX, CLU, COL8A1, ELN, FBLIM1, FBLN2, FN1, GJA5, IGFBP3, LTC4S, MGP, PTGIS, SULF1 |
| C08-01-05 | State (L2) | EC.arterial.homeostatic | endothelial_cell | EC.arterial | ADAMTS6, ALPL, AMD1, CLIC3, FUT8, GLUL, NEBL, NTRK2, PI16, PLS3, PODXL, SGK1, SLC12A2, SLC6A6, VEGFA |
| C08-01-06 | State (L2) | EC.arterial.inflammatory | endothelial_cell | EC.arterial | ADAMTS9, AKAP12, ARID5A, BCL3, CCL2, CD83, CDKN1A, FOSL1, ICAM1, IL6, INSIG1, IRF1, MAFF, NFKBIA, PHLDA1, RCAN1 |
| C08-01-07 | State (L2) | EC.arterial.ion_pump | endothelial_cell | EC.arterial | FXYD6 |
| C08-01-08 | State (L2) | EC.arterial.metabolic | endothelial_cell | EC.arterial | COX7A1, ELOB, NDUFA3, ROMO1, RPL35, RPLP1, RPLP2, RPS14, RPS15, RPS28, SERF2, SRP14, TNNI3, UBL5, UQCR11, UQCRB, UQCRQ |
| C08-01-09 | State (L2) | EC.arterial.mito_contact | endothelial_cell | EC.arterial | COX16, SYNJ2BP |
| C08-02-01 | State (L2) | EC.capillary.activated | endothelial_cell | EC.capillary | CCL2, CCL8, CTSS, CX3CL1, CXCL10, CXCL11, CXCL9, GBP1, GBP4, HAPLN3, IDO1, IFI30, IL32, ISG20, PLA1A, UBD, VCAM1 |
| C08-02-02 | State (L2) | EC.capillary.angiocrine | endothelial_cell | EC.capillary | CLEC3B, CXCL12, GJA4, SRGN |
| C08-02-03 | State (L2) | EC.capillary.angiogenic_tip | endothelial_cell | EC.capillary | APLN, CD9, CHST1, CTHRC1, CXCR4, ESM1, HOMER3, LOX, LY6H, PGF, TNFRSF4, UBTD1 |
| C08-02-04 | State (L2) | EC.capillary.baseline | endothelial_cell | EC.capillary | AQP1, CAV1, CDH5, CLDN5, EMCN, ENG, ESAM, FLT1, ICAM2, KDR, KLF2, KLF4, NOS3, PECAM1, PLVAP, RAMP2, ROBO4, VWF |
| C08-02-05 | State (L2) | EC.capillary.inflammatory | endothelial_cell | EC.capillary | ADAMTS9, APOLD1, CDK17, CREB5, CXCL2, CXCL3, FLT1, HSPA1B, NSUN6, PTPRM, RAPGEF1, SLC20A1, SLC38A2, STARD13, TLE4, TNF, TNFRSF10D |
| C08-02-06 | State (L2) | EC.capillary.migratory | endothelial_cell | EC.capillary | CCDC106, ZNF580, ZNF581 |
| C08-02-07 | State (L2) | EC.capillary.postcap_venule | endothelial_cell | EC.capillary | ACKR1, CLU, CST3, HLA-DPA1, HLA-DPB1, HLA-DRA, PLVAP |
| C08-02-08 | State (L2) | EC.capillary.stress | endothelial_cell | EC.capillary | DDIT3, EGR1, HSPD1, HSPE1, HSPE1-MOB4, NR4A1 |
| C08-03-01 | State (L2) | EC.heart_remodeling.activated_acute | endothelial_cell | EC.heart_remodeling | EMP1, FOS, FOSB, NR4A1, NR4A2 |
| C08-03-02 | State (L2) | EC.heart_remodeling.angiocrine | endothelial_cell | EC.heart_remodeling | DNASE1L3, NRG1, PKHD1L1, VWF |
| C08-03-03 | State (L2) | EC.heart_remodeling.capillary_metabolic | endothelial_cell | EC.heart_remodeling | ABCB1, BTNL9, CA4, CA8, CD36, CLIC5, LNX1, MYO1B, RASA4, RGCC, SORBS2, TPO |
| C08-03-04 | State (L2) | EC.heart_remodeling.perivascular | endothelial_cell | EC.heart_remodeling | C2CD2, CLEC11A, DACH2, FLVCR2, HES4, ISYNA1, LINC01099, NAV3, NCALD, SMTN |
| C08-03-05 | State (L2) | EC.heart_remodeling.remodeling_secretory | endothelial_cell | EC.heart_remodeling | ANO1, APOLD1, AQP3, CD55, CFAP161, CLCF1, COL13A1, ENTPD1, GLUD1, GSN, INHBA, ITGA10, ITGA9, NOS3, NPPC, PI16, PLAT, PRSS23, PTHLH, RAPGEF1, RDH10, SEMA3A, SLC14A1, TIMP3, WNT9B |
| C08-03-06 | State (L2) | EC.heart_remodeling.remodeling_stalk | endothelial_cell | EC.heart_remodeling | B2M, CAV1, CLEC14A, CLU, FN1, HLA-B, ITM2B, MGP, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, RPS3, SPARCL1, TM4SF1, VIM |
| C08-03-07 | State (L2) | EC.heart_remodeling.translation_boost | endothelial_cell | EC.heart_remodeling | EEF1A1, RPL11, RPL12, RPL13, RPL18, RPL18A, RPL19, RPL26, RPL28, RPL29, RPL30, RPL32, RPL34, RPL35A, RPL39, RPL41, RPL8, RPLP1, RPS12, RPS13, RPS14, RPS15, RPS15A, RPS23, RPS27A, RPS28, RPS3, RPS4X, RPS5, RPS8, TPT1 |
| C08-04-01 | State (L2) | EC.liver_sinusoidal.hypoxia_metabolic | endothelial_cell | EC.liver_sinusoidal | ABLIM3, ADD3, AGPAT5, ANKRD37, BNIP3, BNIP3L, DDIT4, DIP2C, EGLN1, EGLN3, ENO1, ERO1A, FAM13A, FCN2, FGF23, FGFR1, FKBP1A, FLT1, GALNT18, GAPDH, GUK1, IL33, INPP5D, INSIG2, LONP1, NGLY1, NPAS2, PDE2A, PDE4D, PEAR1, PGK1, PRKCA, RASGRP3, RIOK3, RNMT, SCARB1, SFMBT2, SLC2A3, SNRK, SNX25, TCAF2, TIPARP, TPI1, VEGFA, WSB1, YEATS2, ZNF292 |
| C08-04-02 | State (L2) | EC.liver_sinusoidal.inflammatory | endothelial_cell | EC.liver_sinusoidal | ARAP2, BAZ1A, CCL2, ICAM1, ITGB3, NFKB1, NFKBIA, NRIP1, PTPN1, SOD2, TNFAIP3, VCAM1 |
| C08-04-03 | State (L2) | EC.liver_sinusoidal.prostanoid | endothelial_cell | EC.liver_sinusoidal | ADAMTS9, ATP1A1, EMP1, HILPDA, NDRG1, PITPNC1, PTGDS, SELE, SELP, TM4SF1, TMTC1 |
| C08-04-04 | State (L2) | EC.liver_sinusoidal.remodeling_lipotoxicity | endothelial_cell | EC.liver_sinusoidal | CBLB, CD36, GDF15, MAML2, MAPRE2, P4HA1, P4HA3, PHLDA1, UBC |
| C08-04-05 | State (L2) | EC.liver_sinusoidal.secretory_lipoprotein | endothelial_cell | EC.liver_sinusoidal | ABCA9, CETP, CFAP97, CIRBP, CLEC1B, CSGALNACT1, DGKG, ENC1, FANCL, FOXN2, GSTK1, IFITM10, IFT88, IL6ST, INTS10, ITSN1, LAP3, LIFR, MYL12B, MYRIP, NOSTRIN, PNN, RAB11A, SELENOP, SMIM7, ST6GAL1, ZDHHC21 |
| C08-04-06 | State (L2) | EC.liver_sinusoidal.stress | endothelial_cell | EC.liver_sinusoidal | BAG3, CLK1, DNAJA1, DNAJB1, DNAJB4, HSPA1A, HSPA1B, HSPA8, HSPB1, HSPD1, HSPE1, HSPE1-MOB4, HSPH1, ID1, ID3, JUN, JUND, TECR, TRA2B, UBB |
| C08-05-01 | State (L2) | EC.lymphatic.activated | endothelial_cell | EC.lymphatic | BTG1, CDKN1A, DNAJB1, FOS, GADD45B, HES1, HSPA1A, JUN, JUNB, NFKBIA, PPP1R15A, RGS16, RHOB, SOCS3, ZFP36 |
| C08-05-02 | State (L2) | EC.lymphatic.baseline | endothelial_cell | EC.lymphatic | EPB41L2, KCNIP1, LYVE1, MMRN1, MYH10, PDE2A, PLSCR4, PPFIBP1, RELN, SPTBN1, STON2, TFPI, TIMP2, WFS1 |
| C08-05-03 | State (L2) | EC.lymphatic.scavenger | endothelial_cell | EC.lymphatic | ANKRD36, ANKRD36B, ANKRD36C, DDX17, DOCK5, FTX, GLS, HECTD4, KALRN, LINC00923, MALAT1, NEAT1, NPIPB13, NPIPB5, STAB2, XIST |
| C08-05-04 | State (L2) | EC.lymphatic.tip_migratory | endothelial_cell | EC.lymphatic | ACTB, ADIRF, CCL21, FSCN1, IGF1, IGFBP2, IGFBP5, IL32, RHOC |
| C08-05-05 | State (L2) | EC.lymphatic.valve | endothelial_cell | EC.lymphatic | BIK, CD24, CHAD, CLDN11, DEGS2, GJA4, GRP, GSTM3, IL20RA, ISYNA1, ODC1, SBSPON, SCG3 |
| C08-06-01 | State (L2) | EC.venous.activated | endothelial_cell | EC.venous | CCL2, CDKN1A, CSF3, ICAM1, IL6, PHLDA1, RCAN1, SELE, SOD2, TM4SF1 |
| C08-06-02 | State (L2) | EC.venous.adipose_lipid | endothelial_cell | EC.venous | CA4, CD320, CD36, FABP4, FABP5, RBP7 |
| C08-06-03 | State (L2) | EC.venous.baseline | endothelial_cell | EC.venous | ACKR1, ADIRF, CCL14, CLU, HLA-DRB5, LY6E, TSPAN7 |
| C08-06-04 | State (L2) | EC.venous.cardiac_structural | endothelial_cell | EC.venous | ANKRD36, CREBZF, EPB41L2, HIF3A, NPIPB13, NPIPB5, PRICKLE4, PTPN5, STX16, SYNE1, TNNC1, TPO, XIST |
| C08-06-05 | State (L2) | EC.venous.quiescent_homeostatic | endothelial_cell | EC.venous | ADGRF5, ALPL, EDNRB, HEY1, MLEC, PLPP1, PLPP3, RGCC, SGK1, TM4SF18, VWA1 |
| C08-06-06 | State (L2) | EC.venous.remodeling_stalk | endothelial_cell | EC.venous | CCND1, COL13A1, COL4A2, CRIP1, EMP3, IGF2, IGFBP5, IL32, ITIH5, LGALS1, PODXL, RAB31 |
| C09-01-01 | State (L2) | EPI.alveolar_type_1.activated | epithelial_cell | EPI.alveolar_type_1 | ANKRD36B, CMTR2, CSNK1G1, EXOC2, GPRC5D-AS1, LINC01473, MIR222HG, MXD1, NABP1, NEAT1, OSBPL11, OTULIN, PHC3, PIK3R3, SHROOM3, SIMC1, TNFAIP3, TSC22D2, UEVLD |
| C09-01-02 | State (L2) | EPI.alveolar_type_1.baseline | epithelial_cell | EPI.alveolar_type_1 | AGER, C19orf33, EMP2, FXYD3, GSTP1, HMGB1, MYL12A, MYL12B, MYL6, PPIA, S100A10, SFTA2, TMSB4X |
| C09-02-01 | State (L2) | EPI.alveolar_type_2.injury_primed | epithelial_cell | EPI.alveolar_type_2 | MAFF, MIR22HG, KLF6, ERRFI1, CDKN1A, SERTAD1, STK17A, EZR, TOP1, KLF5, RASEF, STARD13, DUSP14, TIPARP, CSRNP1, ZFAND5 |
| C09-02-02 | State (L2) | EPI.alveolar_type_2.stress_response | epithelial_cell | EPI.alveolar_type_2 | EGR1, HSPA1B, C2, EGLN3, MSMO1, PSAP, CRTAC1 |
| C09-02-03 | State (L2) | EPI.alveolar_type_2.baseline_surfactant | epithelial_cell | EPI.alveolar_type_2 | SFTPB, LAMP3, SFTPA1, TXNIP, SFTPA2, ASAH1, TSC22D1, SRSF7, SPTSSA, EGLN3, TRA2B, TMBIM6, DAZAP2, LAPTM4A, NAPSA, C2, EPHX1, SELENBP1 |
| C09-03-01 | State (L2) | EPI.bile_duct_cholangiocyte.inflammatory_APC | epithelial_cell | EPI.bile_duct_cholangiocyte | ABRACL, AREG, ASS1, BAX, CD74, CTSE, GDF15, GLRX, IFI6, MDK, MZT2A, SAT1, TMSB10, ZFAS1 |
| C09-03-02 | State (L2) | EPI.bile_duct_cholangiocyte.secretory_mucin | epithelial_cell | EPI.bile_duct_cholangiocyte | ADH1C, AKR1C4, CCPG1, CES1, CIRBP, CRISP3, CYP2C8, ETV1, GATM, GP2, HPN, ISG20, MSMB, MUC3A, MUC5B, NUCB2, PAH, RALYL, RAMP1, RBP4, SCGB2A1, SCGB3A1, SERPINA5, SERPING1, SORD, TMEM50B, VTN |
| C09-04-01 | State (L2) | EPI.cervical_suprabasal.inflammatory_repair | epithelial_cell | EPI.cervical_suprabasal | ADIRF, AIF1L, ARHGDIB, CRNN, CYSRT1, ECM1, ESAM, HILPDA, IL18, KRT78, MAL, PPP1R3C, SH3D19, SMC4, TIPIN |
| C09-04-02 | State (L2) | EPI.cervical_suprabasal.secretory_vesicle | epithelial_cell | EPI.cervical_suprabasal | ARPC1B, ATP6V0B, CD63, CYBA, GPX1, KRTCAP2, NDUFA13, NDUFB1, NDUFC2, SEC61B, SERF2, SSR4, TMA7, TMEM165, TSPAN3, VAMP8, WFDC2 |
| C09-05-01 | State (L2) | EPI.colonic_enteroendocrine.enterochromaffin_serotonin | epithelial_cell | EPI.colonic_enteroendocrine | ADGRG4, ADH6, CD59, CDHR3, CDKN2A, CES1, CHGA, CRYBA2, DDC, GSG1, IGFBP3, LCN15, RAB3C, RAMP1, REG4, SCN3A, TFF1, TFF3, TPH1 |
| C09-05-02 | State (L2) | EPI.colonic_enteroendocrine.Lcell_peptide | epithelial_cell | EPI.colonic_enteroendocrine | ABCC8, CRIP1, ERO1B, FABP5, GCG, IFI27L2, KIF12, NTS, PCSK1N, PYY, RTN1, SELENBP1, UCN3, VIM |
| C09-05-03 | State (L2) | EPI.colonic_enteroendocrine.progenitor | epithelial_cell | EPI.colonic_enteroendocrine | APEX1, BTF3, CD24, EIF3F, HEPACAM2, HES6, HNRNPA0, ILF2, MARCKSL1, MDK, NACA, PRDX1, PTMA, RPAIN, RPL36A, RPPH2, STMN1, TUBB, ZFAS1 |
| C09-06-01 | State (L2) | EPI.colonic_tuft.activated | epithelial_cell | EPI.colonic_tuft | ATF3, BAIAP2, BRD2, EGR1, GADD45B, GLUL, KLF4, NEAT1, NFKBIZ, RHOB |
| C09-06-02 | State (L2) | EPI.colonic_tuft.homeostatic | epithelial_cell | EPI.colonic_tuft | GSTP1, KRT18, MYL6, PPDPF, PTMA, S100A6, SERF2 |
| C09-07-01 | State (L2) | EPI.colonocyte.crypt_progenitor | epithelial_cell | EPI.colonocyte | ATF3, BAIAP2, CACNB2, CCDC88B, CDK6, CROCC, DNAJB1, DUSP8, EGR1, FAM53C, FOSB, GADD45G, GK5, HSPA1A, HSPA1B, HSPH1, ING1, ITGA6, JUN, KIF12, LFNG, LGR5, LINC01819, MIDN, MKNK2, PLK3, PTGDR, RASD1, RGMB, RNF43, SLC12A2, SMOC2, SOX4, TMX4, UTRN, ZBTB10 |
| C09-07-02 | State (L2) | EPI.colonocyte.distal_absorptive | epithelial_cell | EPI.colonocyte | ABCG2, AQP8, CDA, CEACAM7, CLCA4, DHRS9, FABP1, GDA, HDAC9, HPGD, MS4A12, PLAC8, SELENOP, SLC26A3, SLC30A10, SLC51A, SLC51B, TMIGD1, TRIM31 |
| C09-07-03 | State (L2) | EPI.colonocyte.goblet_interface | epithelial_cell | EPI.colonocyte | ANO7, ANXA13, CACNA2D2, DLL1, ENTPD8, FAM174B, HES6, HID1, HPCAL1, KCNMA1, KLK1, L1TD1, LRRC26, PTPRN2, RAB26, RAP1GAP, RASA4, REP15, RETNLB, SPDEF, SPINK4, ST6GALNAC1, TFF3, TOX, TUBA1A, WFDC2 |
| C09-07-04 | State (L2) | EPI.colonocyte.ionocyte_BEST4 | epithelial_cell | EPI.colonocyte | ADCY5, BEST4, CA4, CA7, CEACAM3, CEACAM6, FRMD1, GUCA2A, GUCA2B, HECAM2, LYPD8, MEIS1, NEURL1, NOTCH2, OTOP2, PCSK1N, PRKG1, PRKG2, SCIN, SPIB |
| C09-07-05 | State (L2) | EPI.colonocyte.junction_remodeling | epithelial_cell | EPI.colonocyte | ARC, FOSL1, LAMA3, LIPH, LMO7, LPXN, NEDD4L, NT5DC3, PARD6B, PLAGL1, RELB, SGMS2, SNX9, SPAG9, TLCD1, VCL |
| C09-07-06 | State (L2) | EPI.colonocyte.proximal_transport | epithelial_cell | EPI.colonocyte | B3GALT1, B3GALT5, B3GALT5-AS1, CCL28, EPHX2, ERN2, GPT, LINC02086, MAML2, PHYKPL, PLCE1, RASSF7, SELENBP1, SLC26A2, SLC4A4, ST6GALNAC6, SYTL2, TRPM6, ZRANB2 |
| C09-07-07 | State (L2) | EPI.colonocyte.secretory_boost | epithelial_cell | EPI.colonocyte | CHCHD10, COX4I1, COX5B, COX6A1, COX6C, CYBA, NME2, PFN1, RACK1, RPL8, RPS13, RPS27A, S100A10, TSPAN8, TXN, UQCRH |
| C09-08-01 | State (L2) | EPI.ectocervical_granular.immune_interact | epithelial_cell | EPI.ectocervical_granular | BPIFB1, CCL20, CCL4, CCL5, CD52, CD55, CEACAM7, GNLY, GZMA, GZMB, HP, IL2RG, IL36G, MNDA, NKG7, RGS1, TFF3 |
| C09-08-02 | State (L2) | EPI.ectocervical_granular.inflammatory | epithelial_cell | EPI.ectocervical_granular | ACSL1, ANKRD37, CXCL2, CXCL3, DDIT4, HCG20, HILPDA, KLK6, SAMSN1, TNF, VIM |
| C09-08-03 | State (L2) | EPI.ectocervical_granular.proliferative_basal | epithelial_cell | EPI.ectocervical_granular | C1QBP, DYNLL1, EIF4A1, EIF5A, HNRNPA3, KRT5, RPL21, RPL27, RPL4, S100A16, SFN, SNRPD1, YWHAZ |
| C09-08-04 | State (L2) | EPI.ectocervical_granular.secretory_apocrine | epithelial_cell | EPI.ectocervical_granular | A1BG, ALDH1A2, APOC1, APOE, C9orf72, EREG, ERRFI1, G0S2, GK, IFI30, LY9, LYZ, OSM, PHACTR1, PLA2G7, PLEK, TREM1, VEGFA |
| C09-09-01 | State (L2) | EPI.endocervical_secretory.secretory_translocon | epithelial_cell | EPI.endocervical_secretory | ANAPC16, C18orf32, COX14, CST3, DNAJC15, FKBP2, HLA-DRB5, MUC1, NDUFA4, PCBD1, PET100, RABAC1, SEC61B, SELENOM, SMIM22, SSR4, WFDC2 |
| C09-09-02 | State (L2) | EPI.endocervical_secretory.squamous_barrier | epithelial_cell | EPI.endocervical_secretory | AQP9, CCL4L2, CNFN, CRCT1, CRNN, CSF3R, ECM1, HOPX, IL1B, KRT16, MAL, MUC21, RGS2, SPRR1B, SPRR2A, SPRR2D, SPRR3 |
| C09-10-01 | State (L2) | EPI.esophageal_basal.activated_progenitor | epithelial_cell | EPI.esophageal_basal | CCL2, CXCL14, DST, EGR1, GEM, KRT14, MAT2B, PRKAR1A, SERPINE2, SYT8 |
| C09-10-02 | State (L2) | EPI.esophageal_basal.junctional_barrier | epithelial_cell | EPI.esophageal_basal | CLDN1, CLDN4, CSTA, CSTB, EMP1, FABP5, GJB2, IL1RN, LGALS7, LY6D, PHLDA2, PLAUR, TM4SF1 |
| C09-11-01 | State (L2) | EPI.esophageal_suprabasal.basal_transitional | epithelial_cell | EPI.esophageal_suprabasal | ASS1, CAV1, CH25H, COL17A1, CXCL14, DST, IFITM1, IFITM3, IL1R2, KRT14, ZFP36L2 |
| C09-11-02 | State (L2) | EPI.esophageal_suprabasal.differentiating_keratin | epithelial_cell | EPI.esophageal_suprabasal | C19orf33, CALML3, DAPL1, DSC2, KRT13, LYPD3, PITX1, RHCG, S100A14, SH3BGRL3 |
| C09-11-03 | State (L2) | EPI.esophageal_suprabasal.proliferative_exit | epithelial_cell | EPI.esophageal_suprabasal | CCNB1, CCNB2, GPSM2, KIF20B, PTTG1, RAD21, RCC1, SYNCRIP |
| C09-11-04 | State (L2) | EPI.esophageal_suprabasal.proliferative_G2M | epithelial_cell | EPI.esophageal_suprabasal | ARL6IP1, ASPM, BIRC5, CCNA2, CDC20, CDCA3, CDCA8, CDK1, CDKN3, CENPA, CENPF, CEP55, GTSE1, HMMR, KPNA2, MXD3, PLK1, TOP2A, TROAP, UBE2C |
| C09-11-05 | State (L2) | EPI.esophageal_suprabasal.proliferative_S | epithelial_cell | EPI.esophageal_suprabasal | CDC6, CENPK, CENPM, CENPX, CKLF, DHFR, DNMT1, DUT, GINS2, PCLAF, PCNA, PKMYT1, RRM2, TCF19, TK1, TMEM106C, TYMS |
| C09-12-01 | State (L2) | EPI.extrahepatic_cholangiocyte.barrier_interface | epithelial_cell | EPI.extrahepatic_cholangiocyte | ADGRG6, CLDN1, CLDN4, COL4A1, CREB5, CXCL1, CXCL3, CXCL8, FLNA, GABRP, GADD45A, ITGB8, LAMC2, LURAP1L, MACC1, NFKBIA, TPM1 |
| C09-12-02 | State (L2) | EPI.extrahepatic_cholangiocyte.mucin_secretory | epithelial_cell | EPI.extrahepatic_cholangiocyte | AGR2, CRISP3, DDIT4, ID1, MMP1, MUC3A, MUC5B, PGK1, RASSF7, STK24, SYT8, TFF2, VTN |
| C09-13-01 | State (L2) | EPI.gastric_foveolar.baseline | epithelial_cell | EPI.gastric_foveolar | ACER2, CAPN8, GKN1, GKN2, IL17REL, JRK, KCNE4, LGALS9B, LGALS9C, MUC5AC, RASEF, SLC5A5, SYTL2, SYTL5, TFF1 |
| C09-14-01 | State (L2) | EPI.hepatic_ductular_cholangiocyte.acute_phase_complement | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | APOA1, APOA2, ASGR1, C3, C4A, C4B, C8G, CFB, CP, FTCD, G0S2, GLDC, ITIH3, ITIH4, MST1, NSUN6, ORM1, SAA1, SAA2 |
| C09-14-02 | State (L2) | EPI.hepatic_ductular_cholangiocyte.barrier_chemokine | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | AQP3, AREG, C6orf141, CD63, CLDN4, CLU, COL4A1, CXCL1, CXCL2, CXCL8, EDN1, HLA-A, HLA-B, LAMC2, NRIP1, S100A6, TACSTD2, TFPI2, TM4SF1 |
| C09-14-03 | State (L2) | EPI.hepatic_ductular_cholangiocyte.ion_transport | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | DUOXA2, GALNT12, HHLA2, LGALS2, NPDC1, REC8, SCNN1A, SLC44A4, SYT8, TMC5 |
| C09-14-04 | State (L2) | EPI.hepatic_ductular_cholangiocyte.lipid_mevalonate | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | ACAT2, CCL28, HMGCR, HMGCS1, IDI1, LCN2, NAMPT |
| C09-14-05 | State (L2) | EPI.hepatic_ductular_cholangiocyte.mechanosense_adhesion | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | ANKRD36C, ERICH1, ITGA2, LINC00342, MELTF, MTHFD1L, NRXN3, PIEZO1, SH3D21, TRIO |
| C09-14-06 | State (L2) | EPI.hepatic_ductular_cholangiocyte.polarity | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | CACNA1D, CCDC141, EEPD1, FARP1, FGFR2, GRB14, LAMA1, MAP3K21, MTUS1, PER1, RAP1GAP, TACC1, VEPH1 |
| C09-14-07 | State (L2) | EPI.hepatic_ductular_cholangiocyte.secretory_transport | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | ADK, AMBP, AQP1, BCO2, EEF1B2, FGF13, GABRE, LINC01106, MUC6, PPP1R12B, RBP4, SERPINA1, SULF1, TFRC, TYW1, ZCCHC7 |
| C09-14-08 | State (L2) | EPI.hepatic_ductular_cholangiocyte.stress | epithelial_cell | EPI.hepatic_ductular_cholangiocyte | APOL2, C1orf116, DDIT4, DYRK3, EPPK1, ERO1A, ETS2, ID1, INSIG1, ITPKC, JUN, JUND, LINC00910, MIR210HG, NDRG1, PFKFB3, PLIN3, UBC, ZNF165 |
| C09-15-01 | State (L2) | EPI.ileal_bile_transport.absorptive_xenobiotic | epithelial_cell | EPI.ileal_bile_transport | AMN, APOA1, APOA4, APOC3, APOM, BIRC3, CDHR2, CLCA4, CUBN, CYP3A4, GUCA2A, GUCA2B, HPGD, PKIB, PRAP1, SERPINA1, SLC17A8, TM4SF20, TM4SF5 |
| C09-15-02 | State (L2) | EPI.ileal_bile_transport.detox_transcytosis | epithelial_cell | EPI.ileal_bile_transport | ADH1C, COA3, DMBT1, ENO1, GSTA1, GSTA2, KRT18, KRT19, LGALS2, MT1X, PIGR, REG1A, RPS13, SELENBP1, SULT1E1, TXN |
| C09-16-01 | State (L2) | EPI.ileal_enterocyte_absorptive.brush_border | epithelial_cell | EPI.ileal_enterocyte_absorptive | ACADVL, ACSL5, ACTG1, ATF3, CCNL1, CDHR2, CDHR5, CDKN1A, CLDN4, CYP3A5, DDX5, DGAT1, DUSP1, EGR1, ELF3, EPS8L2, EPS8L3, ETS2, EZR, FHL2, FOS, GADD45B, GDA, GK, HKDC1, IFRD1, JUN, KLF6, LDLR, MALAT1, MCL1, MME, MUC13, MXD1, MYO15B, PCK1, PDK4, POR, RIOK3, SGK1, SLC13A2, SLC5A1, SLC6A19, SQSTM1, SRRM2, TMC5, TNFRSF1A, ZFP36 |
| C09-16-02 | State (L2) | EPI.ileal_enterocyte_absorptive.villus_tip | epithelial_cell | EPI.ileal_enterocyte_absorptive | COX4I1, COX5B, COX6A1, COX6B1, COX7C, FTH1, NACA, NDUFA1, NDUFA4, RPL11, RPL12, RPL17, RPL18, RPL19, RPL22, RPL26, RPL29, RPL30, RPL32, RPL35A, RPL37, RPL39, RPS10, RPS12, RPS15, RPS15A, RPS23, RPS24, RPS25, RPS26, RPS27, RPS28, UQCR10, UQCR11, UQCRB |
| C09-17-01 | State (L2) | EPI.ileal_enterocyte_crypt.baseline | epithelial_cell | EPI.ileal_enterocyte_crypt | CDX1, CDX2, LGALS4, OTC, REG1A, REG1B |
| C09-17-02 | State (L2) | EPI.ileal_enterocyte_crypt.bile_transport | epithelial_cell | EPI.ileal_enterocyte_crypt | AKR7A3, ASS1, FABP1, IFI27, KRT19, KRT20, PTGR1, RARRES1, SDCBP2, SLC51B, SULT1B1 |
| C09-17-03 | State (L2) | EPI.ileal_enterocyte_crypt.proliferative_G2M | epithelial_cell | EPI.ileal_enterocyte_crypt | ASPM, BIRC5, CCNB1, CCNB2, CDC20, CDKN3, CENPF, CENPW, DLGAP5, FYB1, MIA, NUSAP1, PLK1, PTTG1, TESC, TPX2, TROAP, UBE2C |
| C09-17-04 | State (L2) | EPI.ileal_enterocyte_crypt.proliferative_S | epithelial_cell | EPI.ileal_enterocyte_crypt | ATAD2, DUT, GINS2, HELLS, MCM3, MCM5, MCM7, PCLAF, PCNA, PKMYT1, RFC4, SIVA1, TYMS |
| C09-17-05 | State (L2) | EPI.ileal_enterocyte_crypt.secretory_precursor | epithelial_cell | EPI.ileal_enterocyte_crypt | ATOH1, CCL24, DLL1, DMPK, FAM174B, HES6, HPCAL1, KCNMA1, LINC00261, LRRC26, MB, RAB26, REP15, SELENOM, SPDEF, SPINK4, ST6NAC1, TFF3, TMEM61, WFDC2 |
| C09-17-06 | State (L2) | EPI.ileal_enterocyte_crypt.villus_transition | epithelial_cell | EPI.ileal_enterocyte_crypt | APOA1, APOA4, APOC3, C8G, CCL20, CIDEB, CLCA4, CPO, FABP2, FABP6, IL32, LEAP2, MTTP, PRAP1, SERPINA1, SLC15A1, SLC7A9, SULT1A2, TM4SF20, TMIGD1 |
| C09-18-01 | State (L2) | EPI.ileal_goblet.baseline | epithelial_cell | EPI.ileal_goblet | ATOH1, CCL24, CLCA1, GALNT8, REG4, REP15, RETNLB, SPINK4, TPSG1, ZG16 |
| C09-18-02 | State (L2) | EPI.ileal_goblet.immature | epithelial_cell | EPI.ileal_goblet | CDKN3, DTYMK, HMGN2, HSPD1, PTMA, PTTG1, REG1A, RRM2, STMN1, TUBB, UBE2C |
| C09-18-03 | State (L2) | EPI.ileal_goblet.inflammatory_mucin | epithelial_cell | EPI.ileal_goblet | B2M, CEACAM6, ID1, ISG15, ISG20, KRT20, PKIB, PLAC8, TFF1, ZG16 |
| C09-18-04 | State (L2) | EPI.ileal_goblet.stress_metallothionein | epithelial_cell | EPI.ileal_goblet | COX17, MT1E, MT1F, MT1G, MT1H, MT1X, MT2A, NUDT8, OST4, SMIM22 |
| C09-19-01 | State (L2) | EPI.intrahepatic_cholangiocyte_defense.raft_maturation | epithelial_cell | EPI.intrahepatic_cholangiocyte_defense | DTNA, FDFT1, HMGCR, HMGCS1, KRT7, MAGI1, MIB1, NEURL3, NOMO3, PPP1CB, RABGGTB, SQLE, SULT1C4, TCF12 |
| C09-19-02 | State (L2) | EPI.intrahepatic_cholangiocyte_defense.secretory_barrier | epithelial_cell | EPI.intrahepatic_cholangiocyte_defense | AGR2, CD63, CLU, CST3, CTSH, GOLM1, HLA-A, HLA-B, HLA-C, HLA-E, ITM2B, LCN2, PIGR, SERPING1, SPINK1, TMBIM6, TSPAN3, VTN |
| C09-20-01 | State (L2) | EPI.intrahepatic_cholangiocyte_transport.mechanosensing_remodelling | epithelial_cell | EPI.intrahepatic_cholangiocyte_transport | ACTB, ACTG1, ALS2, ANKRD1, CREBBP, FAM66A, FLNA, GADD45A, INHBA, LARGE1, MYH9, NAV2, NUAK2, PHLDB2, POLR2B, PPP1R12B, RFTN1, UBP1 |
| C09-20-02 | State (L2) | EPI.intrahepatic_cholangiocyte_transport.mucin_secretory | epithelial_cell | EPI.intrahepatic_cholangiocyte_transport | ADAM28, AGR2, GABRP, GOLM1, HHLA2, INPP4B, LCN2, LGALS2, LIPH, MEF2C, MUC20, MUC3A, PLXDC2, SLC3A1, SLC44A4, SMPD3, STX1A, TMC5, WDR72 |
| C09-20-03 | State (L2) | EPI.intrahepatic_cholangiocyte_transport.protease_shield_hippo | epithelial_cell | EPI.intrahepatic_cholangiocyte_transport | ANGEL2, ARHGEF12, HLA-A, HLA-B, PTCHD4, SERPINA3, SPINT1, TACSTD2, TM7SF3, WWTR1, YBX3 |
| C09-21-01 | State (L2) | EPI.lung_club_secretory.canonical_surfactant | epithelial_cell | EPI.lung_club_secretory | CA8, CLIC3, ERP27, FMO2, HOPX, LTA4H, MGP, MS4A15, NT5E, RNASE1, SCGB3A2, SFTA2, SFTPB, SUSD2 |
| C09-21-02 | State (L2) | EPI.lung_club_secretory.ciliogenesis_axoneme | epithelial_cell | EPI.lung_club_secretory | CAPSL, CETN2, CFAP157, CFAP53, CFAP73, DNAH12, DNALI1, DYNLL1, EFHC1, MS4A8, PRDX5, RSPH1, SPAG6, TEKT1, TPPP3, ZMYND10 |
| C09-21-03 | State (L2) | EPI.lung_club_secretory.ciliogenesis_primed | epithelial_cell | EPI.lung_club_secretory | ARGLU1, CAPN8, CCNO, DDX17, HES1, LUC7L3, N4BP2L2, ODF2L, OFD1, RBM39, RERE, SRSF7, TCF25 |
| C09-21-04 | State (L2) | EPI.lung_club_secretory.inflammatory | epithelial_cell | EPI.lung_club_secretory | AKR1C1, ASS1, BPIFB1, C3, CXCL1, CXCL6, CXCL8, CYP2F1, KYNU, PRSS23, PTGES, TGM2, TNFSF10, TSPAN8, WFDC2 |
| C09-22-01 | State (L2) | EPI.lung_multiciliated.baseline | epithelial_cell | EPI.lung_multiciliated | CCDC78, CFAP126, CFAP157, CFAP45, CFAP53, CFAP73, DNAH12, DNAI2, DRC1, DYNLRB2, ENKUR, RSPH1, RSPH9, SPAG6, TEKT1, TEKT2, TPPP3, TTC29, TUBA4B |
| C09-22-02 | State (L2) | EPI.lung_multiciliated.mature_motile_cilia | epithelial_cell | EPI.lung_multiciliated | AHI1, ANK3, CCDC30, CDHR3, CFAP157, CFAP43, CFAP46, CFAP47, CFAP54, CFAP70, DCDC1, DDX17, DNAAF1, DNAH11, DNAH12, DNAH7, DRC3, HYDIN, INTU, LRRIQ1, MAPK10, NEK10, ODF2L, RP1, RSRP1, SPAG17, SYNE1, TMEM67, VWA3A |
| C09-22-03 | State (L2) | EPI.lung_multiciliated.stress | epithelial_cell | EPI.lung_multiciliated | ATF3, CCNL1, CD55, DUSP1, EFNA1, FOS, HES1, ID1, JUN, JUNB, KLF6, PPP1R15A, RHOB, SAT1, SERTAD1, TGIF1 |
| C09-23-01 | State (L2) | EPI.pancreatic_acinar.adhesion_remodeling | epithelial_cell | EPI.pancreatic_acinar | ADIPOR2, CREB3L1, CTH, EPB41L4B, EPHB3, GNB5, GPRIN3, ITGB8, NIPAL3, PAG1, RNF38, SLC7A2, SMOC1, SNHG15, SORBS2, ZNF331 |
| C09-23-02 | State (L2) | EPI.pancreatic_acinar.baseline | epithelial_cell | EPI.pancreatic_acinar | AMY2A, AMY2B, ANKRD62, AQP12B, ATXN7, BACE1, BRSK2, C2CD4B, CCKBR, CEL, CELA2A, CELA2B, CELA3A, CELA3B, CHRM3, CLPS, CPA1, CPA2, CPB1, CTRB1, CTRB2, CTRC, CTRL, CUZD1, DTNA, EGF, ENPP1, EPB41L4B, FGFR1, GOLGA8B, GP2, GRB10, HEYL, IL22RA1, INSR, KLK1, KSR1, LHFPL5, LRIG1, MATN4, MIR217HG, MKNK1, NR5A2, PAK3, PBX1, PDIA2, PLA2G1B, PLXNA2, PNLIP, PNLIPRP1, PRSS1, PRSS2, PRSS3, RBPJL, RNF144A, SEL1L, SERPINI2, SLC16A10, SLC7A2, SPINK1, SYCN, TC2N, TCIRG1, TRAF5, TRHDE, ZNF710, ZNF98 |
| C09-23-03 | State (L2) | EPI.pancreatic_acinar.inflammatory_regenerative | epithelial_cell | EPI.pancreatic_acinar | AADAC, ACTN4, ANPEP, ARL14, CD44, CDH1, DOT1L, HCG20, IER3, IL6R, ITPKC, KLF5, OSMR, SERPINB1, SGMS2, SPSB1, VMP1 |
| C09-23-04 | State (L2) | EPI.pancreatic_acinar.metabolic_onecarbon | epithelial_cell | EPI.pancreatic_acinar | AQP12B, C2CD4B, COPB2, DMGDH, IL22RA1, KLK1, LMF2, MAT2A, MATN4, PCK2, PRH1, PRSS3, PSAT1, SLC16A10, SLC43A1, TAS2R14, TOB1, TPST2, ZNF302 |
| C09-23-05 | State (L2) | EPI.pancreatic_acinar.quiet_dedifferentiation | epithelial_cell | EPI.pancreatic_acinar | ANKRD20A1, CHRNA7, ELMO1, GDPD5, GOLGA8A, GSTT2B, KNOP1, LINC02449, MYO15B, NPIPB12, NPIPB13, NUPR1, PPP1R3C, PRPSAP1, PTPN20, RNF212, SCGB1B2P, SUCO, TACC1 |
| C09-23-06 | State (L2) | EPI.pancreatic_acinar.stress | epithelial_cell | EPI.pancreatic_acinar | ATF3, BAG3, BAIAP2, CACYBP, CHORDC1, CLU, CROCC, DNAJA1, DNAJA4, DNAJB1, EGR1, FKBP4, HSP90AA1, HSP90AB1, HSPA1A, HSPA1B, HSPA8, HSPB1, HSPD1, HSPE1, HSPH1, JUND, MKNK2, SERPINH1, STIP1, TECR, UBB, UBC, ZFAND2A |
| C09-24-01 | State (L2) | EPI.pancreatic_ductal_bicarbonate.activated | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | ACTB, EGR1, FOSB, JUN |
| C09-24-02 | State (L2) | EPI.pancreatic_ductal_bicarbonate.barrier_mucin | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | BHLHE40, CYP3A5, ELF3, ERN2, IL18, ITGB1, KLF5, KRT19, LDLR, LGALS3, MUC1, MUC3A, NFKBIZ, S100A6, SH3RF2, SLC44A4, TC2N, TMC5, UGT2B15, WDR72 |
| C09-24-03 | State (L2) | EPI.pancreatic_ductal_bicarbonate.baseline | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | ADAMTS10, BICC1, CASC15, CFTR, FGFR2, FGFR3, FLRT2, FRAS1, GLIS3, GUCY1A2, LINC01948, LRRC7, PDE3A, PDE5A, PDGFD, PKHD1, POU6F2, RIC8B, RUSC2, SLC4A4, SOX6, TRO, TRPV6 |
| C09-24-04 | State (L2) | EPI.pancreatic_ductal_bicarbonate.inflammatory | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | ANKRD33B, CCL2, CXCL8, EGOT, FLNA, IL32, LRRC49, MYH9, NFKB1, NFKB2, NFKBIA, NUAK2, RELB, SAMD4A, SOD2, TNFAIP2, TPM1, VCAM1 |
| C09-24-05 | State (L2) | EPI.pancreatic_ductal_bicarbonate.junctional_remodel | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | AMBP, AQP1, CD81, CLDN3, CTSD, F2RL1, GJA1, KRT7, LAPTM4A, LINC01013, P3H2, PSAP, SFRP5, TACSTD2, TGFB2, THBS1, TNFRSF12A |
| C09-24-06 | State (L2) | EPI.pancreatic_ductal_bicarbonate.renewal_ion_pump | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | ATP1A1, ATP1B1, CDK14, FRMD4A, GMNN, HES4, ISYNA1, LEFTY1, LINC00671, LINC01829, PDCD4, ST3GAL6, VAV3, VTCN1, WDFY2 |
| C09-24-07 | State (L2) | EPI.pancreatic_ductal_bicarbonate.repair_actin_junction | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | ARAP2, CTNNAL1, DOT1L, ETS1, FGFR1, IGF2BP2, MAP4K4, MIR155HG, MIR222HG, MYOF, PFKP, SMAD3, SYNE1 |
| C09-24-08 | State (L2) | EPI.pancreatic_ductal_bicarbonate.stress | epithelial_cell | EPI.pancreatic_ductal_bicarbonate | BAG3, CACYBP, CHORDC1, DNAJB1, DNAJB6, HSP90AA1, HSPA1A, HSPA1B, HSPA8, HSPB1, HSPD1, HSPE1, HSPH1, MRPL18, STIP1, TECR, UBB, ZFAND2A |
| C09-25-01 | State (L2) | EPI.pancreatic_ductal_mucinous.mucin_rich_barrier | epithelial_cell | EPI.pancreatic_ductal_mucinous | AREG, B3GALT5, CEACAM6, CTSD, DLEU1, DUOXA2, INPP4B, LINC02448, MUC4, MYEOV, PLAC8, PTGIS, SULT1E1, TFPI |
| C09-25-02 | State (L2) | EPI.pancreatic_ductal_mucinous.proliferative_gastric_like | epithelial_cell | EPI.pancreatic_ductal_mucinous | A4GNT, CENPK, CENPM, CLSPN, COL4A5, EZH2, FANCA, FUT9, HMGB2, LMNB1, PGC, POLQ, RAD51AP1, SLFN13, SMC4, TFF2, TK1 |
| C09-25-03 | State (L2) | EPI.pancreatic_ductal_mucinous.remodeling_channel_rich | epithelial_cell | EPI.pancreatic_ductal_mucinous | CLDN10, CWC27, HPN, KCNJ15, LGR5, LINC01781, MMP1, MMP7, RAMP1, SERPINA1, SLC3A1, TINAG, VCAN, WDR72 |
| C09-25-04 | State (L2) | EPI.pancreatic_ductal_mucinous.xenobiotic_ERexit | epithelial_cell | EPI.pancreatic_ductal_mucinous | BTBD19, CATSPER2, CE…AM19, CTAGE6, CYP2C19, CYP2C9, LINC00342, LINC01355, NPIPB12, NPIPB13, NPIPB3, NPIPB5, OR2A7, PILRB, SULT1A3 |
| C09-26-01 | State (L2) | EPI.pancreatic_ductal_perivascular.baseline | epithelial_cell | EPI.pancreatic_ductal_perivascular | ACSM3, ANGPTL1, APOD, C7, CFTR, FABP4, KCNJ16, LINC00671, LUM, PDGFD, PLVAP, RFTN2, SLC25A27, TLL1 |
| C09-26-02 | State (L2) | EPI.pancreatic_ductal_perivascular.protective_antioxidant | epithelial_cell | EPI.pancreatic_ductal_perivascular | AMBP, APP, ATP1A1, CD59, CLDN10, CLU, EPCAM, HLA-B, HLA-C, HSP90B1, IGFBP7, ITM2B, LAPTM4A, SERPINA3, SERPINA5, SERPING1, SLC3A1, SOD3, SPINT2, TMEM59 |
| C09-27-01 | State (L2) | EPI.pancreatic_ductal_progenitor.ADM_like | epithelial_cell | EPI.pancreatic_ductal_progenitor | AMY2A, AMY2B, APOD, CELA2A, CELA2B, CELA3A, CELA3B, CLPS, CTRB2, CTRC, IFITM1, INS-IGF2, PRSS2, SPINK1 |
| C09-27-02 | State (L2) | EPI.pancreatic_ductal_progenitor.baseline | epithelial_cell | EPI.pancreatic_ductal_progenitor | ALKAL2, AMBP, BEX1, CDO1, CITED4, GSG1, GYPC, LEFTY1, OLFML3, SERPINA5, TTYH1 |
| C09-27-03 | State (L2) | EPI.pancreatic_ductal_progenitor.biliary_like_xenobiotic | epithelial_cell | EPI.pancreatic_ductal_progenitor | ADH1A, ADH1C, AKR1C1, ALB, C19orf33, CHST4, COLCA1, FXYD3, GC, GSTA1, HSD17B2, LGALS4, PAH, PAPSS2, SCGB3A1, SYT8, UGT2B15 |
| C09-27-04 | State (L2) | EPI.pancreatic_ductal_progenitor.ciliated_transport | epithelial_cell | EPI.pancreatic_ductal_progenitor | CFTR, CTNND1, DANT2, DDX17, GLIS3, KCNJ16, LPP, PKHD1, SLC25A27, SLC28A3, UTY, WSB1, ZBTB20 |
| C09-28-01 | State (L2) | EPI.pancreatic_islet.alpha | epithelial_cell | EPI.pancreatic_islet | ALDH1A1, ARRDC4, ARX, BAIAP2L2, BCAR3, C1orf21, CPNE8, CRYBA2, CSGALNACT1, DPP4, ELL2, FAP, GCG, GLS, HCN3, HS6ST3, HTR1F, IRX2, KCNH6, KCNJ3, KIAA1549L, KIF12, LOXL4, MAMLD1, MIR222HG, MYO10, NBEAL2, PAPPA2, PCSK2, PLCE1, PLPPR1, POU6F2, PRKCE, PTPRT, SERPINE2, SIPA1L3, SLC35F4, SLC38A4, SLC7A2, SNTG1, SNTG2, SPC25, SPOCK3, STK32B, SYNDIG1, TMEM176B, TMEM236, TP53I13, ZDHHC14 |
| C09-28-02 | State (L2) | EPI.pancreatic_islet.beta | epithelial_cell | EPI.pancreatic_islet | ABCC8, ADCYAP1, ALCAM, ARL16, ASB9, BMP5, CNTN5, DACH2, DGKB, DLG2, EDARADD, ELMO1, G6PC2, GPM6A, HADH, HDAC9, IGSF11, KLHL42, LENG8, LINC01099, LRRTM3, MAP1LC3A, MAP2, MEG3, MLXIPL, MTUS2, NCALD, NPTX2, NRG1, P2RY1, PDE3A, PDX1, PFKFB2, PLCH2, PLCXD3, PRUNE2, SAMD11, SGIP1, SLC2A13, STX1A, TCAF2, TGFBR3, TRPM3, UCHL1, UNC5C, VWDE, WSCD2, ZNF10, ZNF385D |
| C09-28-03 | State (L2) | EPI.pancreatic_islet.delta | epithelial_cell | EPI.pancreatic_islet | ABI3BP, ADARB2, ADGRB3, AGTR1, BCHE, CACNA2D3, CRHR2, DPYSL3, EPHA6, ERBB4, EYS, FHOD3, GHR, GPC5-AS1, GRP, HHEX, KCNT2, KHDRBS2, KIAA2012, LAMA1, LEPR, LRFN5, LY6H, MS4A8, RYR1, SALL1, SST, WDR49, ZBTB7C |
| C09-29-01 | State (L2) | EPI.renal_distal_tubule.ciliated_remodelling | epithelial_cell | EPI.renal_distal_tubule | ELOVL7, FTX, GAS2L3, GCNT2, GRB14, KDM6A, LINC-PINT, LINC02298, MAST4, NLGN4Y, NRK, PKHD1, PLIN5, PTPRG, SGIP1 |
| C09-29-02 | State (L2) | EPI.renal_distal_tubule.immune_modulatory | epithelial_cell | EPI.renal_distal_tubule | COBLL1, CYTOR, HKDC1, ID3, IFNGR2, KLF6, LINC01503, LITAF, MIR4435-2HG, PTGER1, PTP4A1, SLPI, TFPI2, TNFRSF12A |
| C09-29-03 | State (L2) | EPI.renal_distal_tubule.ion_transport | epithelial_cell | EPI.renal_distal_tubule | AQP2, ATP1B1, ATP6V1B1, CALB1, CLCNKB, HSD11B2, MAL, PVALB, RALBP1, RHCG |
| C09-29-04 | State (L2) | EPI.renal_distal_tubule.repair | epithelial_cell | EPI.renal_distal_tubule | FXYD2, MARCKSL1, MDK, OCIAD2, RPS19, RPS2, TPM1, VIM |
| C09-29-05 | State (L2) | EPI.renal_distal_tubule.stress | epithelial_cell | EPI.renal_distal_tubule | BAG3, CKS2, CRYAB, DEDD2, DNAJA1, DNAJB1, FOS, HLA-DRA, HSP90AA1, HSP90AB1, HSPA1A, HSPA1B, HSPA8, JMJD6, JUN, SERPINH1, UBB, UBC, ZFAND2A |
| C09-30-01 | State (L2) | EPI.renal_immature_ureteric_bud.defense_secretory | epithelial_cell | EPI.renal_immature_ureteric_bud | AQP1, CLU, CXCL14, DEFB1, MT1X, MT2A, PCP4, PDZK1IP1, RBP4, S100A1, SERPINA1, SLC22A2, TMSB10, TNFSF10 |
| C09-30-02 | State (L2) | EPI.renal_immature_ureteric_bud.osmoprotective | epithelial_cell | EPI.renal_immature_ureteric_bud | CLDN4, FHL2, ID1, ID3, ID4, IGFBP2, IGFBP3, MRPS6, NCOA7, RASD1, SLC5A3, SOD3 |
| C09-31-01 | State (L2) | EPI.renal_intercalated_cell_type_A.acid_secretion | epithelial_cell | EPI.renal_intercalated_cell_type_A | APOE, ATP6AP2, ATP6V1G3, BSG, CKB, CLCNKB, COX7B, IL18, MUC20, PTGER3, SLC25A39, SMIM24, TMEM213 |
| C09-31-02 | State (L2) | EPI.renal_intercalated_cell_type_A.PC_transitional | epithelial_cell | EPI.renal_intercalated_cell_type_A | AQP2, AQP3, EMX1, FXYD4, GAS5-AS1, GSTM3, KRT19, MID1, PCSK1N, PTGER1, RASL11A, RCAN1, TMEM176A, TMEM176B, TPM4 |
| C09-32-01 | State (L2) | EPI.renal_intercalated_cell_type_B.baseline | epithelial_cell | EPI.renal_intercalated_cell_type_B | ATP6V0A4, ATP6V1B1, ATP6V1G3, CA12, CDA, FOXI1, INSRR, KRTAP5-8, MAG, MMD, NTRK1, OXCT1, SLC26A4, SLC4A9, WDR72 |
| C09-33-01 | State (L2) | EPI.renal_principal_cell.activated_acute | epithelial_cell | EPI.renal_principal_cell | ATF3, BTG2, DUSP1, FOS, GADD45B, GDF15, HSPA1B, IRF1, JUN, JUNB, RCAN1, RNF144B, SLC25A25, SOCS3, ZFP36 |
| C09-33-02 | State (L2) | EPI.renal_principal_cell.canonical_vasopressin | epithelial_cell | EPI.renal_principal_cell | ALAS1, AQP2, AVPR2, B4GALNT2, EMX1, FXYD4, GABRA2, GATA3-AS1, PTGER1, RASL11A, SAMSN1, ST6GAL1 |
| C09-33-03 | State (L2) | EPI.renal_principal_cell.inflammatory | epithelial_cell | EPI.renal_principal_cell | BAG3, CXCL1, CYTOR, DDIT3, HSPE1, HSPH1, ICAM1, MAFF, NFKBIA, NFKBID, NR4A1, PHLDA2, PIM3, PMAIP1, PPP1R15A, RHOV, SERPINH1, TNF |
| C09-33-04 | State (L2) | EPI.renal_principal_cell.injury_repair | epithelial_cell | EPI.renal_principal_cell | ANXA2, CLU, GSTP1, HLA-A, PKM, TACSTD2, TMEM176B, TMSB10 |
| C09-33-05 | State (L2) | EPI.renal_principal_cell.intercalated_like | epithelial_cell | EPI.renal_principal_cell | ATP6V1G3, C12orf75, CALCA, CDA, CLEC3B, DMRT2, IL18, LGALS3, LINC00671, LINC01187, PTGER3, RHCG, RNASEK, SLC26A7, TMEM213 |
| C09-34-01 | State (L2) | EPI.renal_proximal_tubule.detox_antioxidant | epithelial_cell | EPI.renal_proximal_tubule | ALB, CA2, CALML3, CXCL14, FABP1, FAM151A, FN3K, FTH1, G0S2, GPX3, PAH, PCSK1N, PRODH2, PSAT1, SH3YL1, SLC22A8, SLC7A7, UGT2B7 |
| C09-34-02 | State (L2) | EPI.renal_proximal_tubule.onecarbon_peroxisome | epithelial_cell | EPI.renal_proximal_tubule | ACAA2, ACY1, ACY3, ASRGL1, BHMT, CYP17A1, DCXR, FMO5, GCAT, GGT1, GLYATL1, GPT, HAO2, LDHD, MPC1, MSRB1, RBP4, UGT2A1 |
| C09-35-01 | State (L2) | EPI.renal_thick_ascending_limb.barrier_repair | epithelial_cell | EPI.renal_thick_ascending_limb | ADIRF, ANXA1, CLDN1, CLDN3, CLDN4, CREB5, CRIP1, EMP3, EZR, IGFBP6, ITM2C, KLF2, PCSK1N, PHLDA2, S100A14, S100A9, TACSTD2, TM4SF1, TMPRSS4, UBD |
| C09-35-02 | State (L2) | EPI.renal_thick_ascending_limb.canonical_salt_transporter | epithelial_cell | EPI.renal_thick_ascending_limb | ACAT1, COX7A1, CXCL12, DNASE1, KNG1, MPC1, MRPS6, NDUFA8, PXMP2, SLC12A1, SLC25A4, SLC25A5, SLC5A3, THY1, UMOD |
| C09-35-03 | State (L2) | EPI.renal_thick_ascending_limb.cation_flux | epithelial_cell | EPI.renal_thick_ascending_limb | ATP6V1B1, C16orf89, CA4, CD59, CLDN16, EFHD1, FOLR1, MEST, MT1E, MT1F, MT1G, MT1H, MT2A, NQ1, PAPPA2, PPP1R1B, SERPINA3, SUCNR1, TIMP1, WFDC2 |
| C09-35-04 | State (L2) | EPI.renal_thick_ascending_limb.remodeling | epithelial_cell | EPI.renal_thick_ascending_limb | DUSP23, HS3ST1, PCP4, SERPINA1, SLC34A2, TPM1 |
| C09-35-05 | State (L2) | EPI.renal_thick_ascending_limb.salt_sensing | epithelial_cell | EPI.renal_thick_ascending_limb | CA2, CPXM2, CRABP1, ECEL1, EMX1, FABP3, LINC01055, NFE2L2, OLR1, SFRP1, TMEM52B, WNK1 |
| C09-36-01 | State (L2) | EPI.salivary_duct_excretory.baseline | epithelial_cell | EPI.salivary_duct_excretory | CALCRL, CASC8, CFH, COLCA1, CPT1B, DDIT4L, GPR12, INHBA, MED24, MT3, RUNX2, SPTSSB, STAU2, TM4SF18, WDR72 |
| C09-36-02 | State (L2) | EPI.salivary_duct_excretory.stress | epithelial_cell | EPI.salivary_duct_excretory | ATF3, DUSP1, FOS, GADD45B, JUN, JUNB, NR4A1, NR4A2, PPP1R15A, SERTAD1 |
| C09-37-01 | State (L2) | EPI.salivary_duct_ion_transport.baseline | epithelial_cell | EPI.salivary_duct_ion_transport | ALKAL1, ASCL3, BSND, CLCNKB, FAM162B, FOXI1, GPRC6A, HEPACAM2, IGF1, INSRR, RARRES2, SLC4A9 |
| C09-38-01 | State (L2) | EPI.salivary_intercalated_defense.basal_EMT | epithelial_cell | EPI.salivary_intercalated_defense | ADH1C, ANXA8, CAV1, CLDN1, DLK2, FHL2, FST, IGFBP4, IGFBP6, IL33, LI… 02066, SEMA3C, SERPINF1, SNAI2, SNCG, SPARC, SYT8, TIMP3, TP63, TPM2 |
| C09-38-02 | State (L2) | EPI.salivary_intercalated_defense.canonical_antimicrobial | epithelial_cell | EPI.salivary_intercalated_defense | AQP5, CD44, CLDN10, CRISP3, ODAM, PIP, S100A1, ZG16B |
| C09-38-03 | State (L2) | EPI.salivary_intercalated_defense.inflammatory | epithelial_cell | EPI.salivary_intercalated_defense | ANXA3, ASS1, C3, CAPG, CFH, DDAH2, ELF3, FXYD5, IFITM3, KRT19, KRT7, LY6E, MIA, PDLIM4, PLSCR1, PTTG1IP, RARRES1, S100A6, TMSB4X |
| C09-39-01 | State (L2) | EPI.salivary_mucous_acinar.baseline | epithelial_cell | EPI.salivary_mucous_acinar | AGR2, ANG, AQP5, BPIFB2, C11orf24, CEACAM6, CGREF1, CHAD, CLDN22, CREB3L4, CRYM, FAM3B, GALE, GLYATL2, KLK11, KLK12, LMAN1L, MAGED2, MIA3, MTA1, MUC5B, NANS, NKX3-1, NUDT8, PRSS23, RNASE4, SPDEF, STARD10, STEAP1, TFF3, TIMP1, TSPAN3, TSPAN8 |
| C09-40-01 | State (L2) | EPI.salivary_myoepithelial.activated | epithelial_cell | EPI.salivary_myoepithelial | ATF3, BTG2, DNAJB1, DUSP1, EGR1, FOS, FOSB, GADD45B, ID3, IER3, JUN, JUNB, NFKBIA, PPP1R15A, ZFP36 |
| C09-40-02 | State (L2) | EPI.salivary_myoepithelial.baseline | epithelial_cell | EPI.salivary_myoepithelial | ADH1C, CLU, COL14A1, DLK2, IL33, LAMB3, MFAP2, MMP2, SCPEP1, SEMA3C, SERPINF1, SNCG, SPINK2, TIMP3, TPM2 |
| C09-40-03 | State (L2) | EPI.salivary_myoepithelial.contractile_repair | epithelial_cell | EPI.salivary_myoepithelial | ACTA2, CST3, IL32, ITGB6, KRT17, MMP10, MMP7, MT2A, MYLK, S100A2, TAGLN, TNFRSF12A, TPM1, TPM2 |
| C09-40-04 | State (L2) | EPI.salivary_myoepithelial.junctional_transport | epithelial_cell | EPI.salivary_myoepithelial | ASS1, ATP1B3, C19orf33, CALML3, CAPNS2, CD24, CLDN7, CRIP1, GPX2, HOPX, IGFBP2, IGFBP6, LSP1, TMSB4X |
| C09-41-01 | State (L2) | EPI.salivary_serous_acinar.quiescent | epithelial_cell | EPI.salivary_serous_acinar | ANKRD36B, ANKRD36C, CDK13, GOLGA8B, LINC-PINT, MACF1, NBEA, NPIPB5, PKN2-AS1, PLEKHG2, PSME4, PTBP2, RAPGEF2, SLC25A27, SUGP2, XIST, ZBTB20, ZZEF1 |
| C09-41-02 | State (L2) | EPI.salivary_serous_acinar.secretory_active | epithelial_cell | EPI.salivary_serous_acinar | ANG, CD24, NDUFA4, NUCB2, NUPR1, PIP, RABAC1, RGCC, RNASE4, RPL18, RPL18A, RPL28, RPL8, RPLP2, RPS14, RPS15, RPS27, RPS29, TPT1 |
| C09-41-03 | State (L2) | EPI.salivary_serous_acinar.seromucous_like | epithelial_cell | EPI.salivary_serous_acinar | AGR3, ATP2C2, B3GNT6, BCAS1, BPIFB2, CACNB4, CAPN8, CAPN9, CNTD1, DANT2, ERN2, FAM177B, GOLM1, KLK11, LINC02122, MAGI2, MUC5B, PAPSS2, RALYL |
| C09-42-01 | State (L2) | EPI.skin_appendage_keratinocyte.ductal_barrier_detox | epithelial_cell | EPI.skin_appendage_keratinocyte | ABI3BP, ALDH3A1, ARL4A, CRYAB, CXCL14, POSTN, SPRY1, TFAP2B, TXNIP, UGT2A1 |
| C09-42-02 | State (L2) | EPI.skin_appendage_keratinocyte.ductal_immune_interacting | epithelial_cell | EPI.skin_appendage_keratinocyte | C1R, C1S, CCL19, CD74, HLA-A, HLA-F, IL11RA, LTF, NFKBIA, NTRK2, SLCO2A1, TNFSF10 |
| C09-42-03 | State (L2) | EPI.skin_appendage_keratinocyte.sebaceous_apocrine | epithelial_cell | EPI.skin_appendage_keratinocyte | ACSBG1, ALCAM, APOE, CIDEA, CYP4F8, HSD11B1, MC5R, MGST1, PPARG, SCARB1, SERPINF1 |
| C09-42-04 | State (L2) | EPI.skin_appendage_keratinocyte.transit_amplifying | epithelial_cell | EPI.skin_appendage_keratinocyte | CENP genes, GINS2, MCM2-7, PCLAF, PCNA, STMN1, TK1, TUBA1B, TYMS, ZWINT |
| C09-43-01 | State (L2) | EPI.skin_follicular_keratinizing.root_infundibulum | epithelial_cell | EPI.skin_follicular_keratinizing | CCL27, EMP1, FSCN3, HCFC1R1, ITGB4, LAMC2, MAP3K8, NUPR2 |
| C09-43-02 | State (L2) | EPI.skin_follicular_keratinizing.transit_amplifying | epithelial_cell | EPI.skin_follicular_keratinizing | AREG, CEBPD, DDX5, EMP3, GLUL, GPX2, IER3, IFNGR1, IGFBP4, IL11RA, IL1R2, MYC, PPP1R15A, STMN1, TNFSF10 |
| C09-43-03 | State (L2) | EPI.skin_follicular_keratinizing.upper_infundibulum | epithelial_cell | EPI.skin_follicular_keratinizing | ANXA2, ANXA8L1, ARPC2, ASS1, HOPX, JUP, KLK5, LSP1, PKM, S100A14, SERPINB7, WFDC5 |
| C09-44-01 | State (L2) | EPI.skin_hair_follicle_bulge.anagen_growth | epithelial_cell | EPI.skin_hair_follicle_bulge | AQP3, BDNF, C16orf74, C1QTNF12, CIDEA, CRABP2, EGLN3, FAM83D, FST, KLK10, KLK11, KRT17, LCN2, LGALS7B, ODC1, PTHLH, SPTSSA, TMEM45A, VIM |
| C09-44-02 | State (L2) | EPI.skin_hair_follicle_bulge.niche_crosstalk | epithelial_cell | EPI.skin_hair_follicle_bulge | ABI3BP, APOE, CDC42EP3, CLDN1, CREB5, GJA1, GJB2, GJB6, IGFBP7, ISOC1, MDK, PHGDH, RAMP1, RARRES2, SPARC, TIMP3, TM4SF1 |
| C09-44-03 | State (L2) | EPI.skin_hair_follicle_bulge.quiescent | epithelial_cell | EPI.skin_hair_follicle_bulge | ADIRF, CLU, HSPB8, SELENOM, TCEAL2, TXNIP, WIF1 |
| C09-45-01 | State (L2) | EPI.skin_hair_follicle_companion.activated_migratory | epithelial_cell | EPI.skin_hair_follicle_companion | AQP3, C16orf74, C19orf33, C1QTNF12, CHCHD10, CIDEA, CRABP2, CRACR2B, FAM83A, FST, IGFL4, IMPA2, LY6D, PTHLH, PTN, SERPINE2, SLC25A5, SOX7, TMEM45A |
| C09-45-02 | State (L2) | EPI.skin_hair_follicle_companion.bulge_anchor_signaling | epithelial_cell | EPI.skin_hair_follicle_companion | COL17A1, CXCL14, DST, FRZB, FTL, GADD45G, GAS6, KRT15, LMO4, MDK, MFAP2, RAC3, SELENOM, SGK1, SOX4, STMN3, TSC22D1, TSPAN7, TUBB3 |
| C09-45-03 | State (L2) | EPI.skin_hair_follicle_companion.gap_junction_contractile | epithelial_cell | EPI.skin_hair_follicle_companion | ACTN1, CAP1, CD82, CSRP1, CTSD, FABP5, GJA1, GJB2, GJB6, MTCH1, MYL9, PARM1, PHGDH, SDC1, SERPINA3, SLC1A6, TM4SF1 |
| C09-46-01 | State (L2) | EPI.skin_interfollicular_spinous.baseline | epithelial_cell | EPI.skin_interfollicular_spinous | CLEC2A, CLEC2B, CYP1A1, DMKN, DSC1, DSG1, GLTP, KRT1, KRT10, MYC, RORA, SOX15, THBD |
| C09-46-02 | State (L2) | EPI.skin_interfollicular_spinous.early_differentiation | epithelial_cell | EPI.skin_interfollicular_spinous | BCL3, CDKN1A, CEBPD, ERRFI1, FOSL1, HBEGF, IRF1, KLF4, MAP1LC3B, NFKBIZ, PPP1R15A, ZC3H12A |
| C09-46-03 | State (L2) | EPI.skin_interfollicular_spinous.inflammatory | epithelial_cell | EPI.skin_interfollicular_spinous | ALDH1A1, CALML3, CARD18, CRABP2, IGFL4, KRT23, RBP1, S100A7, S100A8, SOSTDC1, TMEM45A |
| C09-46-04 | State (L2) | EPI.skin_interfollicular_spinous.proliferative | epithelial_cell | EPI.skin_interfollicular_spinous | CDC45, CENPK, CENPM, CENPS, DHFR, DTL, GINS2, HELLS, MAD2L1, MCM3, PCLAF, RAD51AP1, TK1, TYMS, ZWINT |
| C09-46-05 | State (L2) | EPI.skin_interfollicular_spinous.stress_oxidative | epithelial_cell | EPI.skin_interfollicular_spinous | CCL27, CLEC2B, CRIP1, HES1, MT1E, MT1G, MT1X, MT2A |
| C09-46-06 | State (L2) | EPI.skin_interfollicular_spinous.stress_UPR | epithelial_cell | EPI.skin_interfollicular_spinous | DNAJA1, DNAJB1, FOSB, HSP90AA1, HSPA1A, HSPA1B, HSPA5, HSPA8, HSPH1, KPNA2, SIK1, SLC38A2, UBC |
| C09-46-07 | State (L2) | EPI.skin_interfollicular_spinous.transition_basal | epithelial_cell | EPI.skin_interfollicular_spinous | BGN, COL17A1, CRYAB, DST, KRT14, KRT15, KRT5, MT2A, S100A2, S100A6, SYT8, TIMP1 |
| C09-46-08 | State (L2) | EPI.skin_interfollicular_spinous.upper_lipid | epithelial_cell | EPI.skin_interfollicular_spinous | ACER1, CLIC3, DGAT2, ELOVL4, IVL, KLK7, KRT2, LGALSL, MBOAT2, SBSN, SLURP1, SULT2B1 |
| C09-47-01 | State (L2) | EPI.skin_keratinocyte_basal.basement_anchoring | epithelial_cell | EPI.skin_keratinocyte_basal | COL17A1, CTNNAL1, DLK2, DSP, DST, KRT15, LAMB3, PKP1, SLC39A13, TXNIP |
| C09-47-02 | State (L2) | EPI.skin_keratinocyte_basal.spinous_transition | epithelial_cell | EPI.skin_keratinocyte_basal | DMKN, DSC1, DSG1, KRT1, KRT10, KRT16, KRTDAP, PKP1, THBD, ZNF750 |
| C09-47-03 | State (L2) | EPI.skin_keratinocyte_basal.transit_amplifying | epithelial_cell | EPI.skin_keratinocyte_basal | BIRC5, CENP genes, MKI67, PCLAF, RRM2, STMN1, TK1, TOP2A, TYMS, ZWINT |
| C09-48-01 | State (L2) | EPI.skin_keratinocyte_progenitor.activated_stress | epithelial_cell | EPI.skin_keratinocyte_progenitor | ATP1A1, CHCHD10, CYSTM1, DEFB1, GADD45B, PCMTD1, SAT1 |
| C09-48-02 | State (L2) | EPI.skin_keratinocyte_progenitor.quiescent_stem_like | epithelial_cell | EPI.skin_keratinocyte_progenitor | ABLIM1, ALDH3A2, APOE, CA12, CD44, CLEC2B, DEGS1, DMKN, EHF, GLUL, IL18, KRT10, KRT15, PPP1R14C, SELENOP, SMPDL3A, TGFBI, ZFP36L2 |
| C09-49-01 | State (L2) | EPI.skin_keratinocyte_proliferating.anchor_remodel | epithelial_cell | EPI.skin_keratinocyte_proliferating | ASS1, CDH13, COL17A1, COL18A1, CTNNAL1, DKK3, EMP3, KRT15, NRG1, POSTN, TIMP1, ZFP36L2 |
| C09-49-02 | State (L2) | EPI.skin_keratinocyte_proliferating.detox_repair | epithelial_cell | EPI.skin_keratinocyte_proliferating | ATP1B3, CAVIN1, CDA, CES2, CRABP2, CTSB, CTSD, CYSTM1, GJB2, IGFL2-AS1, IL1R2, KRT23, LDHB, LINC01956, MGST1, PFN2, SAT1, SCPEP1, SEMA3C, TM4SF1 |
| C09-49-03 | State (L2) | EPI.skin_keratinocyte_proliferating.early_spinous_transition | epithelial_cell | EPI.skin_keratinocyte_proliferating | APOE, CCL27, DMKN, ID3, KCNK7, KRT1, KRTDAP, LGALS7, LGALS7B, MT4 |
| C09-50-01 | State (L2) | EPI.skin_sebaceous_duct_luminal.detox_repair | epithelial_cell | EPI.skin_sebaceous_duct_luminal | ALDH1A1, ALDH2, BTG1, CCND1, COMTD1, CXADR, DBI, DMKN, DSP, DYNLL1, EMP2, KLF6, PLAC9, S100A14, SOSTDC1, TMSB4X |
| C09-50-02 | State (L2) | EPI.skin_sebaceous_duct_luminal.ECM_remodelling | epithelial_cell | EPI.skin_sebaceous_duct_luminal | ACSL4, ATP1B1, CTSL, FGF7, FHL2, FOLR1, FST, IGFBP7, ITGB2, ITGB4, NUDT4, SLC1A5, SPARC |
| C09-50-03 | State (L2) | EPI.skin_sebaceous_duct_luminal.immune_interface | epithelial_cell | EPI.skin_sebaceous_duct_luminal | ALDH3A1, ASS1, BCAM, C1R, CCL2, CD74, CTNNAL1, CXCL14, GEM, HLA-DQA1, HLA-DRA, HLA-DRB1, HLA-DRB5, IL1R2, MOXD1, SLC38A5, SLCO2A1 |
| C09-50-04 | State (L2) | EPI.skin_sebaceous_duct_luminal.secretoglobin_neuro | epithelial_cell | EPI.skin_sebaceous_duct_luminal | FARP1, GABRP, GCHFR, GJB6, KRT6B, LRRC32, MYBPC1, NPR3, PDCD4, SCGB1D2, SCGB2A1, SCGB2A2, SNCG, TCN1 |
| C09-51-01 | State (L2) | EPI.skin_sweat_duct_keratinocyte.barrier | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | ACER1, AGR2, ATP6V1C2, C15orf48, C5orf46, CALML5, CST6, GLRX, IGFL2, KLK11, KRTDAP, LCE1C, LY6G6C, NDRG2, RARRES1, SPINK5, TM7SF2 |
| C09-51-02 | State (L2) | EPI.skin_sweat_duct_keratinocyte.cornifying_acrosyringeal | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | BIRC3, CHI3L2, DDIT4, IL32, KRT16, LTF, S100A7, S100A8, S100A9, SERPINB3, SERPINB4 |
| C09-51-03 | State (L2) | EPI.skin_sweat_duct_keratinocyte.proliferative_G2M | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | AURKB, BIRC5, CCNB2, CDC20, CDCA3, CDK1, CDKN3, CENPF, CKS2, HMGB2, KIFC1, MKI67, NUSAP1, PBK, PRC1, PTTG1, STMN1, TOP2A, TPX2, UBE2C |
| C09-51-04 | State (L2) | EPI.skin_sweat_duct_keratinocyte.proliferative_S | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | CDCA7, CDK4, DNMT1, FAM111B, GINS2, MCM3, MCM5, MCM6, MCM7, NASP, PCNA, SLBP, UNG |
| C09-51-05 | State (L2) | EPI.skin_sweat_duct_keratinocyte.repair | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | ANXA3, CSRP1, KRT17, KRT6A, KRT6B, TPM1 |
| C09-51-06 | State (L2) | EPI.skin_sweat_duct_keratinocyte.signal_gate | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | ATF3, FBXW7, HES1, IL33, PIK3C2G, PIK3R1, PPP1R16A, SLC38A2, SOSTDC1, TLE4, TXNIP |
| C09-51-07 | State (L2) | EPI.skin_sweat_duct_keratinocyte.suprabasal_hypoxic | epithelial_cell | EPI.skin_sweat_duct_keratinocyte | ANKRD37, BNIP3, CISH, CLEC2B, CYP17A1, GATM, IL27RA, KRT1, KRT10, NDUFA4L2, PYCARD, RDH16 |
| C09-52-01 | State (L2) | EPI.thymic_cortical.baseline | epithelial_cell | EPI.thymic_cortical | ARID5A, ARL5B, BIRC3, CLDN7, EIF5, HLA-E, IL32, IRF8, LITAF, NFKBID, NINJ1, PELI1, SAA1, SAA2, SLC12A7, TAP1, TNFRSF12A, UBD |
| C09-52-02 | State (L2) | EPI.thymic_cortical.Notch_interface | epithelial_cell | EPI.thymic_cortical | BTBD2, DLL3, L3MBTL1, NYAP1, PLEKHG2, PPM1N, SENP3, SUPT5H, TIMM50, VASP, ZNF584 |
| C09-52-03 | State (L2) | EPI.thymic_cortical.secretory_remodeling | epithelial_cell | EPI.thymic_cortical | ALDH1L1, B3GNT5, BEX4, BMX, CLDN4, DLX5, EGR1, HAS1, HCAR3, HEPACAM2, IGFBP5, MYADM, MYC, PEG10, SELENOP, SGCE, SMIM10L1, SOX9 |
| C09-53-01 | State (L2) | EPI.thymic_medullary.canonical_alarmin | epithelial_cell | EPI.thymic_medullary | ASCL1, CCL19, CST3, DCN, FXYD6, HEY1, IFITM1, IL33, KRT15, LRRC3B, LSP1, NNAT, PTGDS, RGS17, SH3BP5, TMSB4X, VCAN |
| C09-53-02 | State (L2) | EPI.thymic_medullary.hormone_xeno_barrier | epithelial_cell | EPI.thymic_medullary | AR, CCDC74A, CXCL2, CYP1B1, CYP3A5, FIBIN, KCNE4, KHDRBS2, LY6K, MFAP4, PAK3, PPP1R12B, SNCA, SPINK5 |
| C09-53-03 | State (L2) | EPI.thymic_medullary.proliferative_APC | epithelial_cell | EPI.thymic_medullary | CCND1, DCXR, FGF13, HLA-DMB, MEF2C, MFAP2, MUC12, PDLIM2, PRAME, RAC2, RAC3, RNASE7, SLC14A1, STX11, TMEM92 |
| C09-53-04 | State (L2) | EPI.thymic_medullary.stress_APC | epithelial_cell | EPI.thymic_medullary | ARG2, ARID5A, BAZ1A, CRIP1, CSRNP1, EFNA1, FOSL1, HLA-E, LDHA, LMNA, MAFF, SERTAD1, SOD2, TRIB1, TRIP10 |
| C09-54-01 | State (L2) | EPI.tracheal_basal.activated_stress | epithelial_cell | EPI.tracheal_basal | ANKRD37, DDIT4, FOS, GADD45B, GADD45G, HES1, HSPA1A, HSPA1B, ID1, ID3, JUN, JUNB, MT1E, SNHG9, SRSF7, TXNIP, ZFP36 |
| C09-54-02 | State (L2) | EPI.tracheal_basal.homeostatic_progenitor | epithelial_cell | EPI.tracheal_basal | AMD1, ANXA1, CDKN1A, ERRFI1, ETS2, EZR, FOSL1, KLF4, KLF5, KRT17, MIR22HG, PTP4A1, SAT1, STK17A, UBC, ZFAND5 |
| C09-55-01 | State (L2) | EPI.tracheal_submucosal_gland.acinar_serous | epithelial_cell | EPI.tracheal_submucosal_gland | AQP5, AZGP1, BPIFB1, C6orf58, CST3, FAM3D, FOLR1, PIP, PPP1R1B, RNASE1, SSR4, TCN1, ZG16B |
| C09-55-02 | State (L2) | EPI.tracheal_submucosal_gland.ductal_luminal | epithelial_cell | EPI.tracheal_submucosal_gland | ACTG1, CLU, CSTB, DEFB1, KRT7, LGALS3, MYL6, PTMA, RARRES1, SAT1, SOD2, TMSB10, TMSB4X |
| C09-56-01 | State (L2) | EPI.tracheal_suprabasal.secretory_immune | epithelial_cell | EPI.tracheal_suprabasal | ADH1C, AGR2, CD24, CRACR2B, CXCL17, DHRS9, FAM3D, GDF15, KRT7, LCN2, MDK, MSLN, S100A6, SLPI, SMIM22, TMC5, TSPAN8, VMO1, WFDC2, XBP1 |
| C09-56-02 | State (L2) | EPI.tracheal_suprabasal.transitional_wound | epithelial_cell | EPI.tracheal_suprabasal | HNRNPA1, IFITM3, KRT17, KRT5, KRT6A, NPM1, S100A10, SERBP1, SERPINB5 |
| C10-01-01 | State (L2) | FIB.adventitial.activated_remodelling | fibroblast | FIB.adventitial | ADAMTS4, ATP1B3, CTH, HAS1, MT1A, MT1M, NAMPT, NR4A1, NR4A2, NR4A3, RANBP2, RBKS, TIPARP, WT1, ZNF331 |
| C10-01-02 | State (L2) | FIB.adventitial.adhesion_lipid | fibroblast | FIB.adventitial | ARHGAP15, CADM2, CD36, CLCN5, ID4, ISYNA1, ITGA1, ITGA7, OLFML2B, TANC1 |
| C10-01-03 | State (L2) | FIB.adventitial.baseline | fibroblast | FIB.adventitial | ABCA10, ABCA6, ABCA8, ABCA9, ARGLU1, BCL6, BMPER, DDX17, DIO3OS, ECHDC2, EPB41L2, FMO2, RSRP1, SPATA6, SRRM2, TNS2, ZRANB2, PDGFRA |
| C10-01-04 | State (L2) | FIB.adventitial.complement_angiocrine | fibroblast | FIB.adventitial | ANG, APP, C1R, C3, C7, CFD, COL14A1, DCN, FBLN1, GSN, MMP2, PSAP, RNASE4, SERPINF1, SERPING1, SPARCL1 |
| C10-01-05 | State (L2) | FIB.adventitial.inflammatory_activated | fibroblast | FIB.adventitial | ATP13A3, CCL2, CD44, CTSC, CYTOR, EMP1, FN1, IL1R1, LMNA, MIR4435-2HG, PLAUR, PVT1, SERPINE1, SLC20A1, SPHK1, THBS1, TNC, TNFSF12A, VMP1 |
| C10-01-06 | State (L2) | FIB.adventitial.mechano_chemo_sensing | fibroblast | FIB.adventitial | FMO2, KCNMB2, NPHP3, SPRY2 |
| C10-01-07 | State (L2) | FIB.adventitial.mito_secretory | fibroblast | FIB.adventitial | COX16, SYNJ2BP |
| C10-01-08 | State (L2) | FIB.adventitial.PI16_matrix | fibroblast | FIB.adventitial | ACKR3, ADAMTS5, CD55, CLEC3B, CREB5, CYP4B1, DBN1, FBLN2, FBN1, FSTL1, GSN, IGFBP6, MFAP5, NHSL1, PCOLCE2, PI16, SCARA5, SLC4A4 |
| C10-02-01 | State (L2) | FIB.barrier_purinergic.lipid_secretory | fibroblast | FIB.barrier_purinergic | ABCA6, ABCA8, APOD, APP, BEX3, CAVIN1, CDH19, CFH, EID1, ETV1, FGFBP2, FN1, LUM, PI16, PTGDS, RAC1, SERPINF1, SPARCL1, TCF4 |
| C10-02-02 | State (L2) | FIB.barrier_purinergic.stress_GF_binding | fibroblast | FIB.barrier_purinergic | ATF3, CCDC80, CEBPD, EFEMP1, FGF7, IER3, IGFBP5, IGFBP6, NBL1, NFKBIA, RPL7, RPLP0, RPSA, VIM |
| C10-03-01 | State (L2) | FIB.barrier_secretory.homeostasis | fibroblast | FIB.barrier_secretory | CEBPD, CRISPLD2, GPX3, IFITM2, IGFBP7, MGP, MT1X, MT2A, RARRES2, SELENOP, SERPINF1, SOD2, SPARCL1 |
| C10-03-02 | State (L2) | FIB.barrier_secretory.remodeling | fibroblast | FIB.barrier_secretory | ACTG1, CCDC80, CD151, CD248, CYTOR, DBN1, EMP3, HTRA3, IGFBP6, PRSS23, RAB32, RHOA, S100A10, SH3BGRL3, SMIM15, SPARC, TXNDC17, TYMP |
| C10-04-01 | State (L2) | FIB.hepatic_stellate_cell.contractile | fibroblast | FIB.hepatic_stellate_cell | CALD1, CDK5RAP3, CEP112, CREB5, CRIM1, DDAH1, EPB41L2, FILIP1, FLNB, OLFM1, PALLD, PPP1R12B, RAP1A, SYT1, VCL, VIPR1 |
| C10-04-02 | State (L2) | FIB.hepatic_stellate_cell.fibrogenic | fibroblast | FIB.hepatic_stellate_cell | AUP1, BGN, CCBE1, COL6A2, COL6A3, FAM13A, FGFR2, HNRNPDL, HP1BP3, ITGA9, KCNE4, MASP1, MTUS1, NR1H4, PTGIS, RAPGEF5, RGS5, THBS2, TPI1, VEGFA |
| C10-04-03 | State (L2) | FIB.hepatic_stellate_cell.inflammatory | fibroblast | FIB.hepatic_stellate_cell | ADAMTS4, ARID5B, ATP13A3, BAZ1A, CCNL1, DDX21, EMP1, HNRNPU, IRF1, KDM6B, LINC-PINT, MAN2A1, MCL1, NAMPT, NFKBIA, PLK3, PTPN1, RDH10, RGS16, SOD2 |
| C10-05-01 | State (L2) | FIB.interstitial.immune_interact | fibroblast | FIB.interstitial | BTG1, BTG2, CCL2, CDKN1A, CSRNP1, HLA-E, HSPE1, IFITM1, IRF1, JUNB, KIAA0040, MIR22HG, MYC, NFKBIA, SERTAD1, SOCS3, ZFAND5, ZFP36 |
| C10-05-02 | State (L2) | FIB.interstitial.lipid_matrix | fibroblast | FIB.interstitial | ABCA10, ABCA6, ABCA8, ABCA9, ACSM3, APOE, C7, CDH19, LAMA2, LTBP1, MTUS1, PLA2G5, PTN, SCN7A, SPARCL1, SPRY1 |
| C10-05-03 | State (L2) | FIB.interstitial.mesenchymal_APC | fibroblast | FIB.interstitial | CD74, FGF7, GPC3, HHIP, HLA-DRA, HLA-DRB1, HLA-DRB5, ID4, NTRK2, SNCG |
| C10-05-04 | State (L2) | FIB.interstitial.mesenchymal_regulator | fibroblast | FIB.interstitial | A2M, CD82, CNN2, COL13A1, EDIL3, EDNRA, F13A1, FENDRR, FOXF1, GPM6B, ID1, LINC01082, MYLK, NKD2, PITX1, PLAT, ROBO2, TCF21, WFDC1 |
| C10-05-05 | State (L2) | FIB.interstitial.remodeling | fibroblast | FIB.interstitial | C16orf89, CADM3, CLU, CRYAB, CTSK, GPNMB, IGFBP6, MMP2, NPC2, NUPR1, PCOLCE2, PLA2G2A, SFRP1, SFRP2 |
| C10-05-06 | State (L2) | FIB.interstitial.stress_secretory | fibroblast | FIB.interstitial | AQP1, CAPG, CAV1, CRIP1, CRIP2, EMP3, PHLDA2, PRSS23, S100A16, SERPINE2, TNFRSF12A |
| C10-06-01 | State (L2) | FIB.lung_alveolar.mito_secretory | fibroblast | FIB.lung_alveolar | DCN, FTH1, ITM2B, LGALS1, MFAP4, MT-CO1, MT-CO2, MT-CYB, MT-ND3, MT-ND4, MT-ND4L, RARRES2, RGCC, RPL30, RPL35A, RPL6, RPS14, RPS15A, RPS8, S100A6 |
| C10-06-02 | State (L2) | FIB.lung_alveolar.stress_interacting | fibroblast | FIB.lung_alveolar | ABCA6, COL3A1, DPYD, EFCAB7, EPM2AIP1, ETNK1, GAB1, JAK2, LIMA1, NEAT1, NEBL, NFKBIZ, PGAP1, PRKAA2, PTBP2, RBM39, RIC1, SLC38A2, WSB1 |
| C10-07-01 | State (L2) | FIB.neurolectin_mucosa.axon_responsive | fibroblast | FIB.neurolectin_mucosa | COLEC11, DDIT3, KCNN3, KIAA1143, LI... 00863, LY6H, MDK, NRK, NSD1, PDGFRA, RAMP1, SCN7A, SERINC1, STMN1 |
| C10-07-02 | State (L2) | FIB.neurolectin_mucosa.inflammatory | fibroblast | FIB.neurolectin_mucosa | C11orf96, CCL2, CDKN1A, CEBPB, CEBPD, CSRNP1, CXCL2, GEM, ICAM1, IRF1, JUNB, MYC, NAMPT, PNRC1, PPP1R15A, SOCS3, SOD2, THBS1, ZFP36, ZNF331 |
| C10-07-03 | State (L2) | FIB.neurolectin_mucosa.nerve_interface | fibroblast | FIB.neurolectin_mucosa | ANXA2, CAPG, CD9, CLEC3B, CLSTN3, CRIP1, EMP3, IFI27, IGFBP6, IL32, PSME2, RBP5, S100A10, S100A11, S100A6, SLPI, TPPP3, TXN, TYMP, ZNF385A |
| C10-07-04 | State (L2) | FIB.neurolectin_mucosa.remodeling_repair | fibroblast | FIB.neurolectin_mucosa | ADH1B, APOD, GPNMB, IGFBP7, MFGE8, MMP2, PCO LCE, PI16, PLAC9, SMOC2, SOD3, TMEM254 |
| C10-08-01 | State (L2) | FIB.perivascular_interface.lipid_shuttle | fibroblast | FIB.perivascular_interface | APOE, IGFBP4, PRDX1 |
| C10-08-02 | State (L2) | FIB.perivascular_interface.vascular_BM_remodelling | fibroblast | FIB.perivascular_interface | ABCA10, ABCA8, APOD, DDIT4, GADD45G, KATNBL1, LAMA2, NME3, PIK3R3, SLC2A3, TRIM4 |
| C10-08-03 | State (L2) | FIB.perivascular_interface.vasomotor_tone | fibroblast | FIB.perivascular_interface | APCDD1, BCL2L11, ECE1, EMP1, GAS8, GNPNAT1, IGFBP2, MFSD14A, PSMC1, SMARCA2 |
| C10-09-01 | State (L2) | FIB.reticular.ECM_builder | fibroblast | FIB.reticular | ACKR4, CD9, COMP, DIRAS3, FBLN1, HSPB3, MFAP2, MMP2, PCO LCE2, PLPP3, SFRP2, WIF1 |
| C10-09-02 | State (L2) | FIB.reticular.immune_interface | fibroblast | FIB.reticular | BIRC3, BST2, CD59, CD74, CHN1, CLU, HLA-DRB1, IFI27, IFI30, IL32, TNC, UBD, VCAM1 |
| C10-09-03 | State (L2) | FIB.reticular.stress_metallothionein | fibroblast | FIB.reticular | CXCL1, IER3, MT1E, MT1M, MT1X, PHLDA1, PLA2G2A, RARRES1, RPL22L1, SOD2, TNFAIP6, TXN |
| C10-09-04 | State (L2) | FIB.reticular.stromal_niche | fibroblast | FIB.reticular | ABCA8, APOC1, APOD, CCDC80, CXCL12, EFEMP1, EGR1, FOSB, GGT5, IGFBP3, IGFBP7, IL11RA, IL33, ITM2A, RHOB, TXNIP |
| C10-10-01 | State (L2) | FIB.skin_neurosecretory.baseline | fibroblast | FIB.skin_neurosecretory | CPE, FGFBP2, HES1, IGFBP2, KLK1, KLK6, KLK7, NR4A2, STMN2 |
| C10-11-01 | State (L2) | FIB.skin_papillary.baseline | fibroblast | FIB.skin_papillary | AQP1, BGN, COMP, CRABP2, CXCL14, DKK3, LRRC15 |
| C10-12-01 | State (L2) | FIB.skin_sheath.ECM_immune | fibroblast | FIB.skin_sheath | APOD, C1R, C1S, CDKN1A, CFH, COL6A2, CXCL12, CXCL2, HES1, HLA-A, HLA-B, IL32, NAMPT, POSTN, SOD2, TMEM176A, TNFAIP6 |
| C10-12-02 | State (L2) | FIB.skin_sheath.neuro_vascular_interface | fibroblast | FIB.skin_sheath | CRABP1, FIBIN, LIMCH1, LIX1, MED4, MEOX2, PLPP5, RERG, SLITRK6, SPARCL1, SSBP2 |
| C10-12-03 | State (L2) | FIB.skin_sheath.stress_chaperone | fibroblast | FIB.skin_sheath | ASPN, BTG2, COCH, DNAJA1, EMP1, HMOX1, HSP90AB1, HSPA1A, HSPA1B, HSPA8, HSPE1, HSPE1-MOB4, JUN, NR4A1, OGN, PPP1R15A, SERTAD1, UBC |
| C10-13-01 | State (L2) | FIB.skin_tenogenic.baseline | fibroblast | FIB.skin_tenogenic | CNN2, COL11A1, COL1A1, EDNRA, MEF2C, MYL4, POSTN, SPARC, TNMD |
| C10-14-01 | State (L2) | FIB.suburothelial.contractile_myofibroblast | fibroblast | FIB.suburothelial | ACTA2, ACTG2, C1QL1, CNN1, CPE, HHIP, HSD17B6, MYH11, MYL6, MYL9, MYLK, RAMP1, RBP4, SLPI, TAGLN, TPM1, TPM2 |
| C10-14-02 | State (L2) | FIB.suburothelial.homeostasis_matrix | fibroblast | FIB.suburothelial | ADH1B, APOE, C1R, CFD, CFH, CST3, DCN, EFEMP1, FBLN1, GSN, MATN2, MGP, PTN, SERPING1, SMPDL3A, SOD3, TMEM254 |
| C10-14-03 | State (L2) | FIB.suburothelial.inflammatory_prostanoid | fibroblast | FIB.suburothelial | CD40, CX3CL1, ICAM1, IFI30, IL32, MT1A, MT1E, MT1M, MT2A, NFKB2, PTGES, RELB, SLC39A14, SOD2, TNFAIP2, TNFSF10, TSLP, UAP1, UGCG |
| C10-14-04 | State (L2) | FIB.suburothelial.urothelial_interface | fibroblast | FIB.suburothelial | CXCL14, ENPP2, F3, KRT18, NELL2, PLPPR4, RASD1, RBFOX1, SLC14A1, SOSTDC1, STMN1, THBS2 |
| C10-15-01 | State (L2) | FIB.tracheal_subepithelial.baseline | fibroblast | FIB.tracheal_subepithelial | BMP7, CRABP1, DLL1, ENTPD1, FOXF2, IL24, PI15, WNT5A |
| C10-16-01 | State (L2) | FIB.transitioning.ISG_primed_interface | fibroblast | FIB.transitioning | APOE, BST2, BTG1, BTG2, CD74, CDKN1A, CEBPD, CXCL2, CYP7B1, IFI27, IFI30, IFI35, IFI6, IL32, ISG15, JUNB, MYC, NNMT, NR4A1, PNRC1, PSME2, SOCS3, TNFAIP6, UBD, VCAM1, ZFP36 |
| C10-16-02 | State (L2) | FIB.transitioning.matrix_stress | fibroblast | FIB.transitioning | CLEC2A, COL18A1, COL1A1, COL3A1, COL4A2, CPE, ETS1, F13A1, GADD45G, GRAMD2B, NTM, RAB31, RGCC, RGS2, SERPINE1, SPARC, STC2, STMN1, TMEM119, TSC22D3 |
| C10-16-03 | State (L2) | FIB.transitioning.motility_remodelling | fibroblast | FIB.transitioning | AK1, CAPG, CAPS, CLEC3B, DKK3, GALNT15, IGFBP6, SH3BGRL3 |
| C10-16-04 | State (L2) | FIB.transitioning.secretory_procollagen | fibroblast | FIB.transitioning | ABCA8, ADH5, COL1A2, HOMEZ, LOXL2, MAK16, PLD3, SEC23B, TCF4, TXNIP, UBXN4, XRN2 |
| C11-01-01 | State (L2) | GRANU.MAST.activated_acute | granulocyte | GRANU.MAST | ADAMTS9, COL4A1, CPEB4, FIGN, GJA1, ITGA2, KDM6A, LATS2, LRIG3, NCEH1, PDE5A, PTGS2, SLC19A2, SLC20A1, TFRC |
| C11-01-02 | State (L2) | GRANU.MAST.activated_repair | granulocyte | GRANU.MAST | ARHGAP9, CCL20, DGUOK-AS1, ITGA5, ITPKA, LINC01807, MEIS2, PIEZO1, RCL1, ROR1-AS1, SPOCD1, SRM, TENM3, TNIK |
| C11-01-03 | State (L2) | GRANU.MAST.resting_granule | granulocyte | GRANU.MAST | ACAT2, CCKBR, CREG1, DHCR7, EBP, FADS1, FDPS, HSD17B7, IDH1, MMD, MSMO1, MVD, NSDHL, NUDT8, PNPLA3, QPRT, TMEM97 |
| C11-02-01 | State (L2) | GRANU.neutrophil.antiviral_endotoxin | granulocyte | GRANU.neutrophil | ABCA8, ACSM3, ATAD2, BMP3, DAPK1, FAM13C, FSCN3, GLIDR, GRB14, HMGB2, HUWE1, PIK3R1, PPM1H, PRELID2, SOX4, TBC1D4, TNXB, YPEL3 |
| C11-02-02 | State (L2) | GRANU.neutrophil.primed_degranulation | granulocyte | GRANU.neutrophil | CLN3, CNKSR3, GRTP1, HDHD3, HILPDA, HS3ST1, NBPF14, NDRG4, OSBPL11, PDCD4, PLD2, RAB3IP, RASD1, RGS14, TMEM87A, VMP1 |
| C11-02-03 | State (L2) | GRANU.neutrophil.tissue_patrolling | granulocyte | GRANU.neutrophil | AEN, BAX, BBC3, CDKN1A, CYGB, DDB2, FAS, GDF15, MDM2, NINJ1, PHLDA3, RRM2B, SPATA18, TRIM22, TYMS |
| C12-00-01 | State (L2) | GRNLSA.angiocrine_mechanosensory | granulosa_cell | GRNLSA.granulosa_cell | ADGRG1, ALDOC, ANG, BEX1, CALB2, COTL1, DOK5, DPYSL4, E2F7, ENO2, FSCN1, GBP2, GLIPR1, GNG11, GPR146, GSTA1, HTRA1, IGFBP5, MCAM, MT1A, MT3, PDLIM7, PPP1R14A, RHOBTB3, RNASE4, TNC |
| C12-00-02 | State (L2) | GRNLSA.chemokine_mechanosensory | granulosa_cell | GRNLSA.granulosa_cell | AADAC, AQP11, AREG, BASP1, CTNNAL1, DNAJC1, FDX1, MBOAT7, NMT2, PIM3, PPARG, PRSS23, SMIM14 |
| C12-00-03 | State (L2) | GRNLSA.cholesterol_mevalonate | granulosa_cell | GRNLSA.granulosa_cell | ABCG1, ALDH1L2, ASNS, CAMTA2, CFH, CHAC1, CLGN, CYP3A5, DDIT3, EFHD1, EIF4EBP1, HPCAL4, MTHFD2, NUPR1, PCK2, PHGDH, PSAT1, SESN2, SLC7A11, TRIB3 |
| C12-00-04 | State (L2) | GRNLSA.EMT_insulin_signaling | granulosa_cell | GRNLSA.granulosa_cell | ATF3, CD69, DNAJB1, DUSP1, EGR1, FOS, FOSB, HSPA1B, JUN, JUNB, KLF6, NR4A1, PPP1R15A, RASGEF1B, RGS1, SERTAD1, SRSF3, TSC22D3, ZFP36 |
| C12-00-05 | State (L2) | GRNLSA.lipid_hypoxia | granulosa_cell | GRNLSA.granulosa_cell | ACSL4, AREG, BIRC3, CDC42EP3, CREM, EMD, GLUL, GNA15, GNS, HERPUD1, HSPA5, LEO1, LMNA, LRRFIP1, MAP3K8, PAK1, PNPLA8, PRKX, REL, RELB, SELENOK, SLC7A5, SYAP1, VAPA |
| C12-00-06 | State (L2) | GRNLSA.p53_damage | granulosa_cell | GRNLSA.granulosa_cell | CMA1, COMMD2, COX8A, CSTB, CTSG, HPGD, HYAL3, IFITM1, IFITM3, MGST3, PTPRA, RWDD4, S100A4, SCOC |
| C12-00-07 | State (L2) | GRNLSA.proliferative_migratory | granulosa_cell | GRNLSA.granulosa_cell | CCDC88A, CCRL2, FTH1, IFI30, ISG15, ISG20, LY96, SQSTM1 |
| C12-00-08 | State (L2) | GRNLSA.secretory_remodeling | granulosa_cell | GRNLSA.granulosa_cell | ALOX5AP, ARPC2, CAP1, CST7, CYBA, S100A11, S100A12, S100A6, TXN |
| C12-00-09 | State (L2) | GRNLSA.stress_metabolic | granulosa_cell | GRNLSA.granulosa_cell | ACTR3, CAPZA1, CDC42EP3, COTL1, CYTH4, ICAM1, PLEK, TNFAIP3 |
| C13-00-01 | State (L2) | HPC.CLP_B_primed | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | ACY3, BLNK, CCR7, CCR9, CD7, CD79A, CNTNAP2, DNTT, IFNG-AS1, IRF8, JCHAIN, KIAA0087, LGMN, LINC00865, LSAMP, LTB, MME, NPTX2, PACSIN1, SPON1 |
| C13-00-02 | State (L2) | HPC.GMP_granulocytic | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | CEBPA, CFD, CLEC11A, CLEC12A, CST7, CTSG, FCGR1A, HGF, HOMER3, HRH2, IGLL1, MGST1, MPO, RAB32, RNASE2, TNFSF13B |
| C13-00-03 | State (L2) | HPC.GMP_inflammatory | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | ANXA1, CD9, CRIP1, CRIP2, CXCL8, EMP1, FHL1, GBP2, GSN, ID1, ID2, ID3, LAG3, MAMDC2, PTMS, S100A10 |
| C13-00-04 | State (L2) | HPC.LMPP | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | ANGPT1, CD48, GIMAP7, GNG11, HLF, HOPX, IFITM1, IPO11, LINC01819, LRRC70, MFAP4, NKAIN2, NOG, NPAS3, RCSD1 |
| C13-00-05 | State (L2) | HPC.MEP | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | BMP2K, CNRIP1, CTNNBL1, CYTOR, FBXO7, FCER1A, GATA1, GATA2, ICAM4, MINPP1, MPP1, NAA38, PDLIM1, PKIG, PRKAR2B, PSTPIP2, SLC40A1, SMIM1, SNX5, TFR2 |
| C13-00-06 | State (L2) | HPC.MPP_activated | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | BTG2, C11orf96, C6orf62, CROCC, EGR1, KCNQ10T1, LINC00910, PPP1R10, RHOB, SDCBP2, SLC9A1, SNAI1, SOCS1, TSPYL2, TUBB4B, WDR74 |
| C13-00-07 | State (L2) | HPC.MPP_IEG | haematopoietic_progenitor_cell | HPC.haematopoietic_progenitor_cell | AVP, BEX1, CDH7, CLEC14A, CLEC3B, HES1, HSD17B14, IDS, KLF4, LMNA, MLF1, NR4A2, PTGS2, RASSF6, RILPL2, SELENOM, SGIP1, TCEAL2, ZNF331 |
| C14-01-01 | State (L2) | HEP.acute_phase.baseline | hepatocyte | HEP.acute_phase | AKAP7, C3, CFAP221, CFHR4, CYP2E1, LIPG, MYOM1, NAMPT, ORM1, PLA2G2A, SAA1, SAA2 |
| C14-01-02 | State (L2) | HEP.acute_phase.complement_antiviral | hepatocyte | HEP.acute_phase | C4A, C4B, CYP3A5, DDX21, DDX24, DST, FTCD, HIPK2, IFITM1, ITPR2, MAN2C1, PARP14, RRBP1, SETD2, SON, SRRM2, STAT2, UPF2 |
| C14-01-03 | State (L2) | HEP.acute_phase.complement_metabolic | hepatocyte | HEP.acute_phase | ADH4, ANGPTL3, C8B, CDO1, CFHR1, CFHR2, DNAJB1, EGLN3, HSD17B13, HSPE1, IGFBP1, LEAP2, MCL1, MPC1, P4HA1, SLC2A2, SPTSSA, TTPA, VNN1, ZFP36L1 |
| C14-01-04 | State (L2) | HEP.acute_phase.hypoxia_lipid | hepatocyte | HEP.acute_phase | AHSG, AQP3, EFNA1, ERO1A, GSTM2, HILPDA, NDRG1, RAP2B |
| C14-01-05 | State (L2) | HEP.acute_phase.inflammatory | hepatocyte | HEP.acute_phase | CCL20, CLIC4, CXCL1, CXCL3, CXCL8, FCAMR, FTH1, ICAM1, IRF1, MAP3K8, NFKB1, NFKB2, NFKBIA, RND1, TNFAIP2, TNFAIP3, TNIP1, UBD |
| C14-01-06 | State (L2) | HEP.acute_phase.proliferative | hepatocyte | HEP.acute_phase | CENPM, CENPU, CLSPN, DTL, E2F7, E2F8, EXO1, FAM111B, FANCI, HELLS, KIF24, MCM10, NCAPG, NUSAP1, PRC1, RIBC2, TCF19, UHRF1, WDR76 |
| C14-01-07 | State (L2) | HEP.acute_phase.stress_secretory | hepatocyte | HEP.acute_phase | ALB, APOA1, APOC3, APOE, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CYB, MT-ND1, MT-ND3, MT-ND5, RBP4, TTR |
| C14-02-01 | State (L2) | HEP.canalicular_transport.baseline | hepatocyte | HEP.canalicular_transport | ADGRG6, AFM, AKR7A3, CEBPD, CFHR3, CYP2C8, DEPDC7, EGLN3, FGG, GADD45G, GALNT2, IFNGR1, ITPR2, NCKAP5, PDCD4, PLG, PLGLB2, SERINC5, SIPA1L2, SPTSSA |
| C14-02-02 | State (L2) | HEP.canalicular_transport.ductular_like_transition | hepatocyte | HEP.canalicular_transport | AKR1B10, APOL1, APOL2, CD24, CDH6, DAB2, DNAH11, ETS1, HNF1B, KRT7, MOB3B, NCEH1, NEURL3, RASEF, RASGRP3, SYNJ2, TPM1, TYMP, UBD |
| C14-02-03 | State (L2) | HEP.canalicular_transport.inflammatory | hepatocyte | HEP.canalicular_transport | ACSL1, ADRA1A, ADRA1B, AKAP7, APMAP, C6, CYP2E1, GBP1, HPX, HSPA1A, HSPA1B, MTHFS, SAA1, SAA2, SGK1, SLCO1B3 |
| C14-02-04 | State (L2) | HEP.canalicular_transport.injury_stress | hepatocyte | HEP.canalicular_transport | ATF3, CREB5, DTNA, GDF15, HKDC1, KLHL29, LINC01151, LINC01564, LURAP1L, MEAF6, NEDD9, RAP2B, SOX4, TTTY4B |
| C14-02-05 | State (L2) | HEP.canalicular_transport.pericentral_like_hypoxia | hepatocyte | HEP.canalicular_transport | DNAJC12, MAPK4, NDRG1, PPARGC1A, SCD, TBX3 |
| C14-02-06 | State (L2) | HEP.canalicular_transport.secretory_ERAD_UPR | hepatocyte | HEP.canalicular_transport | ARHGEF10L, CADPS2, CRELD2, DERL3, FABP1, FBXO16, FCGR2B, GPLD1, GPRC5C, GRM8, ID1, IER3, NUCB2, PDGFRA, RASSF7, TF |
| C14-02-07 | State (L2) | HEP.canalicular_transport.sterol_lipid_biosynthesis | hepatocyte | HEP.canalicular_transport | ALDH2, APBA1, FAXDC2, GPAM, HAO2, HMGCS1, INSIG1, LIFR, LSS, PER1, PKLR, SAT2, SORL1, SRD5A1, VIL1 |
| C14-03-01 | State (L2) | HEP.pericentral_lipoprotein.ApoB_coagulation | hepatocyte | HEP.pericentral_lipoprotein | APOB, APP, C2, C3, C4B, CALR, CD63, CES2, COL18A1, CYP2D6, F2, FN1, HLA-A, HSPA5, IGFBP2, ITIH3, LAMP2, LRPAP1, PDIA3 |
| C14-03-02 | State (L2) | HEP.pericentral_lipoprotein.UPR_redox | hepatocyte | HEP.pericentral_lipoprotein | ACTB, ALDH2, ATF3, ATF5, BCL3, CCND1, CEBPB, CEBPD, DCXR, GATM, MT1F, MT2A, PHLDA1, PNRC1, PTGES3, PXDC1, SEPHS2, SERP1, SOD1, XBP1 |
| C14-04-01 | State (L2) | HEP.periportal_metabolic.acute_phase_barrier | hepatocyte | HEP.periportal_metabolic | ATP1A1, CASP4, DHODH, ETV6, LBP, MT1X, NCOA7, NRP1, PLSCR1, PLSCR4, SAA1, SAA2, SAA4, SERPINA3, TGM2, TJP2, TRPM4, UNC5CL |
| C14-04-02 | State (L2) | HEP.periportal_metabolic.apolipoprotein_secretory | hepatocyte | HEP.periportal_metabolic | ALB, AMBP, APOA1, APOC3, APOE, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, RPLP1, TTR |
| C14-04-03 | State (L2) | HEP.periportal_metabolic.canonical_urea_cycle | hepatocyte | HEP.periportal_metabolic | ALDOB, BAAT, CYP2A7, FDFT1, FST, HAL, HMGCR, HMGCS1, HSD17B13, HSD17B2, INSIG1, MSMO1, SQLE, TAT, TOB1 |
| C14-04-04 | State (L2) | HEP.periportal_metabolic.inflammatory_activated | hepatocyte | HEP.periportal_metabolic | ACTN4, AKR1C1, CTNNAL1, CXCL8, DNAAF1, DTNA, ETS1, FAM107B, FAT1, GBP1, IL18, KLHL29, LINC01909, LINC02015, MYH9, NFKB1, NFKBIA, PLA2G4C, UBD |
| C14-04-05 | State (L2) | HEP.periportal_metabolic.stress_chaperone | hepatocyte | HEP.periportal_metabolic | ACTB, DNAJB1, EGR1, FOS, FOSB, HSPA8, HSPH1, JUN, KLF10, LRG1, SERPINH1, SERTAD1, THAP11, UBB |
| C14-04-06 | State (L2) | HEP.periportal_metabolic.stress_checkpoint | hepatocyte | HEP.periportal_metabolic | ABCA1, AKAP12, ARL5B, ASAP1, CD274, HILPDA, IL1R1, IPMK, LIMK2, LOXL4, PIP4K2A, PNP, PPP4R4, RALGDS, RUFY3, SIPA1L2, TANC1, YBX3 |
| C14-04-07 | State (L2) | HEP.periportal_metabolic.urea_onecarbon_secretory | hepatocyte | HEP.periportal_metabolic | ACSF2, AVPR1A, CA5A, CALD1, CCDC88A, CTAGE6, CTAGE8, DDX24, ENO3, ERBB2, EYS, FAM157C, FTCD, IFITM1, IGHMBP2, LAMA5, MED13, MIB2, MPHOSPH8, PILRA, POLR1E, RCN3, RRBP1, SCO2, TIAM2, UPF2, ZC3H13 |
| C14-04-08 | State (L2) | HEP.periportal_metabolic.xenobiotic_detox | hepatocyte | HEP.periportal_metabolic | ADH1B, ALDH1L1, AOX1, CYP2C19, CYP2E1, CYP3A4, CYP3A43, SLCO1B3 |
| C15-00-01 | State (L2) | IPSC.axial_identity_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | CTXN1, DNM1P35, FAM200A, FOXB1, HNRNPM, HOXA-AS2, HOXA3, HOXA9, HOXB8, RBM42, SMARCA5, SOX2, THAP2 |
| C15-00-02 | State (L2) | IPSC.canonical_pluripotent | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | ASS1, GDAP1L1, POU5F1, PPP1R1A, VAT1 |
| C15-00-03 | State (L2) | IPSC.endoderm_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | CALCA, CLDN7, CRIP2, EDNRB, EEF1A2, EPCAM, FOXA2, HSPB8, LNCpress1, OLIG1, PLD1, POU5F1, PPIC, RARRES2, SLC7A11, TFF3, TRH, VWA5A |
| C15-00-04 | State (L2) | IPSC.mesenchymal_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | ABCA1, ADAMTS2, ATCAY, ATP1A2, CDON, COL1A1, COL1A2, DLK1, FRY, IGFBP5, KIFC3, LRP2, MIR503HG, OLFM2, PLLP, SFRP1, THBS2, ZIC3 |
| C15-00-05 | State (L2) | IPSC.mesendo_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | CDC42EP5, CLDN11, DPEP1, GPM6A, GREB1, HOXC4, IGF2, NEFM, PDE4B, PROCR, SCG5, SULT1C4, TGFA, VAMP8, WFDC2 |
| C15-00-06 | State (L2) | IPSC.mesodermal_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | ABCG1, AIF1, CITED1, DLL3, ENPP2, FABP5, FGF9, FOXC1, ITM2A, MIXL1, MME, MSGN1, NKG7, PDGFRA, RSPO3, S1PR3, ST8SIA6, TBX6, TNFSF11A, VWA2 |
| C15-00-07 | State (L2) | IPSC.midbrain_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | CNTN2, CNTNAP2, GALNT10, GLI3, GRPR, IGFBP3, ISM1, LHX5, LLGL2, LMO1, NRIP3, OTX1, OTX2, SHISA2, SORCS2, TPBG, ZFHX4 |
| C15-00-08 | State (L2) | IPSC.neural_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | ANGPT1, APLNR, BTBD17, CRABP1, EGR2, EPHA7, FABP7, FAM107A, GLUD2, KLHDC8B, LRRC7, MAGEL2, NRGN, PTX3, RFX4, TSPAN7 |
| C15-00-09 | State (L2) | IPSC.neuroendocrine_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | CERKL, CPLX2, DCC, DCX, DRD2, EBF2, EBF3, EYA2, INSM1, NEUROD1, NEUROD4, NEUROG3, NHLH1, NPY, P2RX3, RGR, SSTR2, SUSD2, ZNF385D |
| C15-00-10 | State (L2) | IPSC.proliferative | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | AURKB, CDC25C, CDCA3, CDCA5, CENPK, CENPW, CKS1B, DIAPH3, DTL, E2F7, FEN1, MELK, NDC80, ORC6, PCLAF, RANBP1, RRM2, SPC25, UBE2T, ZWINT |
| C15-00-11 | State (L2) | IPSC.stress | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | ADM, DUSP5, HMOX1, HSPA1A, HSPH1, KCNF1, MAFF, PPP1R15A, YRDC, ZFAND2A |
| C15-00-12 | State (L2) | IPSC.stromal_primed | induced_pluripotent_stem_cell | IPSC.induced_pluripotent_stem_cell | ARL4C, CFAP69, COL14A1, DMTN, GREB1L, HOXB9, LRIG3, MCM6, PRKG1, SERINC5, SOX2, STEAP1, ZNRF3 |
| C16-00-01 | State (L2) | ILC2.activated | innate_lymphoid_cell_2 | ILC2.innate_lymphoid_cell_2 | ATF3, BTG2, CD69, DUSP1, FOS, HSPA1B, JUN, JUNB, LST1, LTB, MYLIP, NFKBIA, NR4A1, TAGAP, TMIGD2, TNF, WDR74, ZFP36L1 |
| C16-00-02 | State (L2) | ILC2.migratory | innate_lymphoid_cell_2 | ILC2.innate_lymphoid_cell_2 | CHST12, CWC27, HAPLN3, IL32, ITGAM, LIME1, NLRP1, PPP1R3E, TNFRSF18 |
| C16-00-03 | State (L2) | ILC2.quiescent | innate_lymphoid_cell_2 | ILC2.innate_lymphoid_cell_2 | BZW1, CD55, CRIP1, EZR, FTH1, HNRNPU, LMNA, MYADM, PABPC1, TAGLN2 |
| C17-01-01 | State (L2) | MAC.alveolar.biosynthetic_sterol_heme | macrophage | MAC.alveolar | ALAS1, CYP51A1, DOK2, LMNA, NGRN, PFDN2, TGM2 |
| C17-01-02 | State (L2) | MAC.alveolar.capillary_interacting | macrophage | MAC.alveolar | ANTXR2, ANXA6, BASP1, CLEC10A, CORO1A, CRIP2, FCGR2B, FCN1, GPR183, IGFBP7, KCNN4, PDGFB, PID1, PTGER2, RASSF2, RNASE1, SERPINB9 |
| C17-01-03 | State (L2) | MAC.alveolar.inflammatory | macrophage | MAC.alveolar | ACKR3, AQP9, CCL3, CCL4, CCRL2, CD101, CD69, CXCL5, IL1A, IL1RN, IL23A, IL6, MIR155HG, MMP19, MRC1, NLRP3, TNF, TNIP3 |
| C17-01-04 | State (L2) | MAC.alveolar.lipid_autophagy | macrophage | MAC.alveolar | ACP2, AKR1C3, CA2, FDX1, GPNMB, HES2, NR1H3, PRSS23, RBP4, RETREG1, SCD, UGCG |
| C17-01-05 | State (L2) | MAC.alveolar.scavenging_endocytic | macrophage | MAC.alveolar | AAK1, CD163L1, CFB, MGAT4B, NBEAL1, PINK1-AS |
| C17-01-06 | State (L2) | MAC.alveolar.stress_metabolic | macrophage | MAC.alveolar | CISH, FFAR4, FOS, GADD45B, GADD45G, HSPA2, KLF2, LYZ, PDK4, PTAFR, RGS2, TSC22D3, TXNIP |
| C17-02-01 | State (L2) | MAC.kupffer.fibrogenic | macrophage | MAC.kupffer | ALMS1, ANKRD36C, BAZ1A, CD163L1, DDX24, FILIP1L, FYB1, IL1B, LINC00342, MYCBP2, MYO15B, MYO9A, PARP14, RCN3, RNF213, SAP25, SCO2, SNX6, TAGLN, ZNF532 |
| C17-02-02 | State (L2) | MAC.kupffer.inflammatory | macrophage | MAC.kupffer | ABL2, BIRC3, CCL3, CCL4, CSF1, CXCL2, CXCL3, CXCL8, DCSTAMP, EMP1, ICAM1, IER3, MIR155HG, NRIP3, TNFAIP3 |
| C17-02-03 | State (L2) | MAC.kupffer.metabolic | macrophage | MAC.kupffer | CD109, CD9, CHMP1B, DDIT4, FOSL2, GPAT3, GPR183, INSIG1, LFNG, LY9, MAT2A, NR4A3, RGS1, RPL10, SATB1, SLC2A3, STAB1, TFRC, VEGFA, ZNF331 |
| C17-02-04 | State (L2) | MAC.kupffer.monocyte_like | macrophage | MAC.kupffer | ACAP1, ANKRD44, CKLF, CLEC10A, DGCR8, FLT3, HGF, JAML, MNDA, PLXNC1, SPSB3, TXNIP |
| C17-02-05 | State (L2) | MAC.kupffer.stress | macrophage | MAC.kupffer | DNAJB1, FCHO2, HMOX1, HSP90AA1, HSP90AB1, HSPA1A, HSPA1B, HSPB1, HSPE1, HSPH1, LGMN, MCOLN1, P4HA1, PPP1R15A, PTCH2, SLC26A11, TECR, UBB, UBC, ZFYVE16 |
| C17-02-06 | State (L2) | MAC.kupffer.tolerogenic | macrophage | MAC.kupffer | ANKH, C1QA, C1QB, C1QC, CD163, EPB41L3, EXT1, GPR65, LILRB5, LIPA, MMD, MS4A4E, ORMDL1, PTPN6, RAB31, SLC40A1, SPRED1, SRGAP2, VSIG4 |
| C17-03-01 | State (L2) | MAC.LAM.anti_inflammatory | macrophage | MAC.LAM | ALCAM, ALDH1A2, CD82, DUSP4, IL1RN, ODC1, PHLDA1, TSPAN12 |
| C17-03-02 | State (L2) | MAC.LAM.antimicrobial | macrophage | MAC.LAM | IFI6, IL2RG, LGALS2, LYZ, SDS, SPARC |
| C17-03-03 | State (L2) | MAC.LAM.inflammatory_APC | macrophage | MAC.LAM | APOE, C1QA, C1QB, C1QC, CLEC10A, CPVL, CTSC, DUSP1, FCN1, FOLR2, GPNMB, HLA-DP, HLA-DQ, HLA-DR, IL1B, LTA4H, NAMPT, NR4A1, S100A8, S100A9, SELENOP, SMPDL3A |
| C17-03-04 | State (L2) | MAC.LAM.lipid_opsonization | macrophage | MAC.LAM | AMDHD2, CFB, FSCN3, PINK1-AS, PNPLA6, RETN, SCO2, SLC15A3, TRIM28 |
| C17-03-05 | State (L2) | MAC.LAM.lipid_phagocytosis | macrophage | MAC.LAM | ARPC1B, CALM3, DBI, ELOC, MATK, NDUFB9, RAC2, RGCC, TM4SF19 |
| C17-03-06 | State (L2) | MAC.LAM.perivascular_angiocrine | macrophage | MAC.LAM | CA4, CAV1, CCL14, CLDN5, CRIP2, GNG11, ID1, IGFBP4, LDB2, RAMP2, SPARCL1, TM4SF1 |
| C17-04-01 | State (L2) | MAC.MDM.APC_dendritic | macrophage | MAC.MDM | AFF3, CD1C, CD1E, CKLF, CLEC10A, CXCR4, EZR, FCER1A, GPAT3, IL1R2, INSIG1 |
| C17-04-02 | State (L2) | MAC.MDM.complement_resolving | macrophage | MAC.MDM | C1QA, C1QC, CD163, CD163L1, DAB2, F13A1, FOLR2, IGF1, LGMN, LILRB5, LTC4S, LYVE1, MS4A4A, PLTP, RGL1, RNASE1, SELENOP, SLCO2B1, STAB1, WWP1 |
| C17-04-03 | State (L2) | MAC.MDM.inflammatory_phagocytic | macrophage | MAC.MDM | CD300E, CLEC12A, FCAR, FCN1, HK3, LST1, LYST, RAB24, RIPOR2, S100A12, S100A8, S100A9, SLC11A1, STXBP2, TCF7L2, TCIRG1, UTRN |
| C17-04-04 | State (L2) | MAC.MDM.LAM_like | macrophage | MAC.MDM | APOC1, APOC2, APOE, CD9, CSTB, CTSD, FABP4, FABP5, LGALS3, PLA2G7, SDC2, TREM2 |
| C17-05-01 | State (L2) | MAC.microglia_like.inflammatory_chemokine | macrophage | MAC.microglia_like | BTG2, CCL2, CCL3, CCL4, CCL4L2, CD69, CD83, EGR1, FOS, IL1B, NFKBIA, NR4A1, NR4A2, PPP1R15A, TNF |
| C17-05-02 | State (L2) | MAC.microglia_like.patrolling_adhesive | macrophage | MAC.microglia_like | CDC34, CEACAM4, CX3CR1, FCGR3A, GINS3, IRF5, ITGAM, LPAR5, SELPLG, TXNIP, VSIG4, WLS |
| C17-05-03 | State (L2) | MAC.microglia_like.phagocytic_redox | macrophage | MAC.microglia_like | ANXA2, ATP6V1F, CTSD, CYSTM1, GSTP1, IFI30, LGALS1, LGALS3, MYL6, PFN1, PRDX1, S100A10, S100A11, S100A6, TXN, VIM |
| C17-06-01 | State (L2) | MAC.proliferating.DNA_replication | macrophage | MAC.proliferating | ANAPC11, CENPX, DEK, PCLAF, RANBP1, RPA3, SUMO2, TYMS |
| C17-06-02 | State (L2) | MAC.proliferating.stress | macrophage | MAC.proliferating | ARL6IP1, EVI2B, HSD17B11, LMNA, LYZ, SELENOP |
| C17-07-01 | State (L2) | MAC.resident_cardiac.antigen_presenting | macrophage | MAC.resident_cardiac | CD1C, CD74, CX3CR1, FLT3, HLA-DPA1, HLA-DRB1, IL18R1, TRAF3IP3 |
| C17-07-02 | State (L2) | MAC.resident_cardiac.inflammatory_reparative | macrophage | MAC.resident_cardiac | CXCL2, CXCL3, FABP5, FN1, IFI30, ITGAX, NAMPT, PPARG, SPP1, TREM2 |
| C17-07-03 | State (L2) | MAC.resident_cardiac.phagocytic_homeostasis | macrophage | MAC.resident_cardiac | AP2A2, DAB2, F13A1, LGMN, LILRB5, LYVE1, PLTP, SIGLEC1, STAB1, TNFAIP2 |
| C17-08-01 | State (L2) | MAC.resident_iron.APC_iron_sensing | macrophage | MAC.resident_iron | CD302, CLEC10A, CPVL, FCGR2B, FCN1, FOLR2, HCST, HLA-DQA1, IFITM2, IFITM3, LYZ, SEC62, SLC40A1, TXNIP, VSIR |
| C17-08-02 | State (L2) | MAC.resident_iron.heme_catabolism | macrophage | MAC.resident_iron | ACP5, ASAH1, CD59, CD9, CTSL, GPNMB, LGMN, TREM2 |
| C17-08-03 | State (L2) | MAC.resident_iron.heme_recycling | macrophage | MAC.resident_iron | DAB2, EGFL7, FOLR2, HPGDS, LILRB5, LYVE1, MAMDC2, PMP22, RNASE1 |
| C17-08-04 | State (L2) | MAC.resident_iron.redox_metabolic | macrophage | MAC.resident_iron | CD52, CSTB, FABP4, FABP5, FDX1, IL1RN, ITGB1BP1, MATK, PHLDA1, PPDF, RGCC, SPOCD1, TM4SF19, YBX1 |
| C17-08-05 | State (L2) | MAC.resident_iron.stress_tolerogenic | macrophage | MAC.resident_iron | AREG, CD1C, CFP, COTL1, CREM, CSRNP1, G0S2, IDO1, MARCKSL1, MIR4435-2HG, PHLDA2, PKIB, PPA1, PPIF, S100A8, STX11 |
| C17-09-01 | State (L2) | MAC.resident_repair.antigen_presenting | macrophage | MAC.resident_repair | CLEC10A, FCER1A, FCN1, HLA-DPA1, HLA-DPB1, HLA-DRA, HLA-DRB1, VSIR |
| C17-09-02 | State (L2) | MAC.resident_repair.chemokine_angiocrine | macrophage | MAC.resident_repair | CCL8, CTSC, CXCL12, DAB2, EGFL7, F13A1, FOLR2, IFI44L, MS4A4A, RNASE1, SELENOP, WWP1 |
| C17-09-03 | State (L2) | MAC.resident_repair.ECM_stromal_crosstalk | macrophage | MAC.resident_repair | CCL13, CFB, CFD, CRIP1, HPGDS, METRNL, MT-ND2, S100A4, S100A6 |
| C17-09-04 | State (L2) | MAC.resident_repair.lipid_phagocytic | macrophage | MAC.resident_repair | ACP5, APOE, CD9, FABP5, IFI30, LGALS3, MGLL, TREM2, VIM |
| C17-09-05 | State (L2) | MAC.resident_repair.stress_iron | macrophage | MAC.resident_repair | ADGRE2, CIITA, KMO, KYNU, NUMB, SLC8B1, TFRC |
| C18-00-01 | State (L2) | MEL.dedifferentiated_migratory | melanocyte | MEL.melanocyte | EFNB2, FOSB, HSPA13, IRF4, KLF4, NEAT1, PLXNC1, PPP1R10, SEMA6A, SLC19A2, SLC38A2, TGFBR1 |
| C18-00-02 | State (L2) | MEL.mature_oxidative_traffic | melanocyte | MEL.melanocyte | CALR, CAPG, COX7B, FEZ1, RAB32, S100A1, SLC25A4, SYNGR1 |
| C18-00-03 | State (L2) | MEL.neurotrophic_migratory | melanocyte | MEL.melanocyte | ABCA8, ARHGDIB, ARID5B, FRZB, GPX3, ITM2A, MGP, NRP2, NTRK2, NUPR1, PDLIM3, SYNPR, UBD |
| C18-00-04 | State (L2) | MEL.secretory_quiescent | melanocyte | MEL.melanocyte | ADIRF, CADM3, CHI3L2, CLU, CRABP1, ENTPD2, FGFBP2, GADD45B, NDRG2, NR4A1, PTX3, SCRG1, SELENOM, SUSD4, TTYH1, ZFP36L1 |
| C18-00-05 | State (L2) | MEL.stress_glucocorticoid | melanocyte | MEL.melanocyte | ATP1B1, BIK, EZR, FKBP5, GSTM1, LINC00462, MT1E, MT1M, OR7A5, OR7C1, TSC22D3 |
| C19-00-01 | State (L2) | MESO.activated_migratory | mesothelial_cell | MESO.mesothelial_cell | ARHGAP42, BHLHE40, CADM3, DLC1, DPYSL3, EGR3, FAM163A, FOXN3, GALNT15, GAS7, NGF, NR4A1, PAMR1, PDLIM3, PODXL, RARB, SPARCL1, STUM, TRPM3, TSHZ2 |
| C19-00-02 | State (L2) | MESO.activated_stress | mesothelial_cell | MESO.mesothelial_cell | ATF3, DCTN6, DDX3X, FOSB, JUN, KLF2, KLF4, TOB1 |
| C19-00-03 | State (L2) | MESO.antiviral | mesothelial_cell | MESO.mesothelial_cell | DDX60, DDX60L, EIF2AK2, IFI44L, IFIT3, IFITM1, IRF7, MX1, MX2, OAS2, OAS3, PARP14, PLSCR1, RSAD2, SLFN5, STAT1, TRIM22, ZBP1 |
| C19-00-04 | State (L2) | MESO.baseline | mesothelial_cell | MESO.mesothelial_cell | ITLN1, KRT18, KRT19, KRT8, LRRN4, MSLN, MUC16, PDPN, UPK3B, WT1 |
| C19-00-05 | State (L2) | MESO.secretory_structural | mesothelial_cell | MESO.mesothelial_cell | CLU, HP, ITLN1, SERPING1, UPK3B |
| C20-00-01 | State (L2) | MG.baseline | microglia | MG.microglia | CSF1R, CX3CR1, HEXB, ITGB5, OLFML3, P2RY12, SALL1, SELPLG, TMEM119, TREM2 |
| C20-00-02 | State (L2) | MG.expanding | microglia | MG.microglia | NACA, RPL11, RPL12, RPL14, RPL19, RPL23A, RPL26, RPL32, RPL37, RPL37A, RPLP2, RPS15, RPS18, RPS24, RPS25, RPS27, RPS4X, RPS6, RPS8, TPT1 |
| C20-00-03 | State (L2) | MG.phagocytic_APC | microglia | MG.microglia | ACTB, APOE, C1QA, C1QB, C1QC, CD63, CD68, CD74, CD81, CYBA, FCGR3A, HLA-DRB1, HLA-DRB5, LAPTM5, PLD4 |
| C21-01-01 | State (L2) | MONO.CD14.APC_like | monocyte | MONO.CD14 | ABI3, APOBEC3A, CD74, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRA, HLA-DRB1, PSME2 |
| C21-01-02 | State (L2) | MONO.CD14.baseline | monocyte | MONO.CD14 | CCR2, CD14, CTSS, LGALS3, LST1, S100A8, S100A9, VCAN |
| C21-01-03 | State (L2) | MONO.CD14.cord_tolerance | monocyte | MONO.CD14 | ADM, ATF3, DDIT4, DNAJB4, GADD45A, HSPA1B, ID1, JUN, NFKBIZ, NR4A1, TRIB1 |
| C21-01-04 | State (L2) | MONO.CD14.inflammatory | monocyte | MONO.CD14 | BIRC3, CCL20, CXCL1, CXCL3, CXCL4L2, GJB2, IL1A, IL1B, IL23A, SOD2, TNFAIP6 |
| C21-01-05 | State (L2) | MONO.CD14.platelet_bound | monocyte | MONO.CD14 | CAVIN2, ITGA2B, ITGB3, MPIG6B, MYL9, PF4, PPBP, SPARC, TREML1 |
| C21-01-06 | State (L2) | MONO.CD14.remodeling | monocyte | MONO.CD14 | TNFAIP2, TNFSF12 |
| C21-01-07 | State (L2) | MONO.CD14.repair_M2_like | monocyte | MONO.CD14 | CTSB, DAB2, FABP5, GPNMB, LGMN, LYVE1, MS4A4A, RGS1, RNASE1, TREM2, VSIG4 |
| C21-02-01 | State (L2) | MONO.CD16.baseline | monocyte | MONO.CD16 | CX3CR1, FCGR3A, LILRB1, PTPRC |
| C21-02-02 | State (L2) | MONO.CD16.hepatic_mac_like | monocyte | MONO.CD16 | APOC1, C1QA, C1QB, C1QC, CD14, CD163, CLEC10A, FOLR2, HLA-DMA, HLA-DQA1, LGALS2, LGMN, MS4A6A, RNASE6, SELENOP, VSIG4 |
| C21-02-03 | State (L2) | MONO.CD16.inflammatory | monocyte | MONO.CD16 | APOBEC3A, CSF3R, FBP1, NCF1, PLAC8, PLBD1, S100A8, S100A9, SULT1A4, VCAN |
| C21-02-04 | State (L2) | MONO.CD16.patrolling | monocyte | MONO.CD16 | CAP1, CKB, CSF1R, LRRC25, LYN, PECAM1, PGK1, PPM1N, PTPN6, PTPRC, QPRT, SELPLG, SIGLEC10, TNFRSF1B |
| C21-02-05 | State (L2) | MONO.CD16.platelet_bound | monocyte | MONO.CD16 | BEX3, CAVIN2, CCL5, CMTM5, F13A1, GNG11, GP9, GRAP2, ITGA2B, ITGB3, MPIG6B, MYL9, NRGN, PF4, PPBP, PRKAR2B, SPARC, TREML1, TUBB1 |
| C22-00-01 | State (L2) | MUSC.activated_migratory | muscle_stem_cell | MUSC.muscle_stem_cell | APOD, CAV1, CCL2, CD74, CHRDL2, CXCL2, DLK1, FABP5, IFI27, IFITM3, IGFBP2, IGFBP7, PFN1, TAGLN, TAGLN2, TIMP1, TMSB10, TMSB4X |
| C22-00-02 | State (L2) | MUSC.baseline | muscle_stem_cell | MUSC.muscle_stem_cell | CALCR, CDH15, CXCR4, ITGA7, MYF5, NCAM1, PAX7, SPRY1, VCAM1 |
| C22-00-03 | State (L2) | MUSC.early_activation | muscle_stem_cell | MUSC.muscle_stem_cell | BCL3, CEBPB, DES, MIR4435-2HG, MT1M, MYC, NNMT, SERPINA3, SOCS3, SOD2 |
| C22-00-04 | State (L2) | MUSC.quiescent_reservoir | muscle_stem_cell | MUSC.muscle_stem_cell | ADM, DIO3, G0S2, ID2, LINC00910, MAFB, RASD1, SLC47A1, SNHG12 |
| C23-00-01 | State (L2) | NK.adaptive_adipose_stress | natural_killer_cell | NK.natural_killer_cell | CD3E, CREM, DNAJB6, FAM177A1, HSPE1, JMJD6, KLRC2, LDHA, MT1E, MT1X, MT2A, RGS2, TUBA4A, TUBB2A |
| C23-00-02 | State (L2) | NK.adaptive_axis_baseline | natural_killer_cell | NK.natural_killer_cell | CD3E, CD52, HLA-DRB1, KLRC2 |
| C23-00-03 | State (L2) | NK.adaptive_biosynthetic_primed | natural_killer_cell | NK.natural_killer_cell | AK6, AKR1C3, CD3E, HLA-DRB1, KLRC2, TAF9 |
| C23-00-04 | State (L2) | NK.adaptive_classII_inhibitory | natural_killer_cell | NK.natural_killer_cell | CD3E, HLA-DPB1, HLA-DQA1, HLA-DRB1, HLA-DRB5, KLRC2, KLRC3, LAG3, LILRB1 |
| C23-00-05 | State (L2) | NK.adaptive_HLAE_tuned | natural_killer_cell | NK.natural_killer_cell | KLRC4 |
| C23-00-06 | State (L2) | NK.adaptive_immature_precursor | natural_killer_cell | NK.natural_killer_cell | CD160, CD27, GZMK, HLA-DQA1, HLA-DRB1, KLRC2, TCF7, TIGIT |
| C23-00-07 | State (L2) | NK.adaptive_terminal_cytotoxic | natural_killer_cell | NK.natural_killer_cell | CD5, CD6, FGFBP2, GNLY, KLRG1, SIT1, ZNF683 |
| C23-00-08 | State (L2) | NK.cytokine_axis_baseline | natural_killer_cell | NK.natural_killer_cell | CLIC3, FCER1G, KLRB1 |
| C23-00-09 | State (L2) | NK.cytokine_biosynthetic_primed | natural_killer_cell | NK.natural_killer_cell | AK6, AKR1C3, CEBPD, FCER1G, IGFBP7, TAF9 |
| C23-00-10 | State (L2) | NK.cytokine_lung_immediate_early | natural_killer_cell | NK.natural_killer_cell | AREG, CCL4, CCL4L2, CREM, CSRNP1, DUSP2, HSPA1A, HSPD1, HSPE1, ICAM1, NFE2L2, NFKBID, NR4A1, NR4A2, REL |
| C23-00-11 | State (L2) | NK.cytokine_quiescent | natural_killer_cell | NK.natural_killer_cell | REPIN1, ZNF775 |
| C23-00-12 | State (L2) | NK.cytokine_repair_primed | natural_killer_cell | NK.natural_killer_cell | FCER1G, HAUS7, IGFBP7, TREX2 |
| C23-00-13 | State (L2) | NK.cytokine_tissue_activation | natural_killer_cell | NK.natural_killer_cell | CCL3, CCL4, CCL4L2, CD69, DUSP2, FCER1G, NFKBIA, XCL1, XCL2 |
| C23-00-14 | State (L2) | NK.cytokine_tissue_resident | natural_killer_cell | NK.natural_killer_cell | CXCR6, FCER1G, FOS, GZMK, ITM2C, NR4A1, PLP2, RGS1, RGS16 |
| C23-00-15 | State (L2) | NK.cytokine_vascular_patrolling | natural_killer_cell | NK.natural_killer_cell | AKR1C3, CEBPD, CX3CR1, FCER1G, IGFBP7, RFLNA, SPON2 |
| C23-00-16 | State (L2) | NK.immature_bridge | natural_killer_cell | NK.natural_killer_cell | CCR7, GZMK, IGFBP4, IL7R, SELL, TCF7 |
| C24-01-01 | State (L2) | NEU.EXC_CT.Ca2_sensor | neuron | NEU.EXC_CT | ALCAM, APOD, ATP1B2, BHLHE40, CAMK2A, CTNNB1, DCBLD1, GABRA5, GABRD, GLRA3, HPCA, HPCAL1, ITM2C, KCNG3, LGMN, MRAP2, NR4A2, NRGN, NTM, OLFML2B, PCDH11X, RAB8B, SCN3B, SEZ6L, ZBTB7C |
| C24-01-02 | State (L2) | NEU.EXC_CT.Ca2_signaling | neuron | NEU.EXC_CT | CDH12, CEP126, CTNNAL1, GALNTL6, ITPR2, LINC02223, LINGO2, LRMDA, PLCE1, PPFIBP1, RASSF4, TIA1, TTC29, ZNF286A |
| C24-01-03 | State (L2) | NEU.EXC_CT.projector | neuron | NEU.EXC_CT | ADGRL2, CADPS2, CPLX2, CREG2, EPB41L3, EPHA4, GABRA3, GNAL, HLF, HOPX, KCNA1, KCNQ5, LDB2, LSAMP, NCALD, NECAB1, PCDH10, PCDH7, PEX5L, PPP1R1A, RSPO2, RSPO3, SCN1A, SEMA5A, SORCS1, SORL1, SPOCK1, SYNDIG1, TCF4, WLS |
| C24-01-04 | State (L2) | NEU.EXC_CT.remodeling | neuron | NEU.EXC_CT | B2M, CADM1, COLCA1, ELAVL2, EPB41L4A, FGFR1, GALNT13, HLA-A, HLA-C, IGFBP5, KCNIP1, MGAT4C, PTN, PTPRT, SEZ6, SPHKAP, UNC13C, UTRN, VCAN |
| C24-02-01 | State (L2) | NEU.EXC_IT.adhesion | neuron | NEU.EXC_IT | CCK, CDH12, CDH13, CNTN4, CTNNA2, GRIK3, IGSF21, LRP1B, NFIA, NPTX1, PEG10, SOX5 |
| C24-02-02 | State (L2) | NEU.EXC_IT.callosal | neuron | NEU.EXC_IT | ADCYAP1, ADGRF5, CALB1, PIK3C2G, CNGB1, COL5A2, GRB14, LAMA2, NFIB, NTNG1, SYT10, ZBBX |
| C24-02-03 | State (L2) | NEU.EXC_IT.guidance | neuron | NEU.EXC_IT | ACVR1C, CERKL, DOCK10, EPHA6, PTPRO, GALNT13, GNAL, GREB1L, ITGA4, LAMP5, MEIS2, NEUROD1, SEMA3C, STXBP6, CDH9 |
| C24-02-04 | State (L2) | NEU.EXC_IT.neuromodulated | neuron | NEU.EXC_IT | BCAM, CD163L1, CLMP, COBLL1, GNG4, KCNH5, MME, MYLK, NGB, NPFFR2, PKP1, PLCH1, ITGA11, SLC38A11, TSHZ2, VWC2L |
| C24-02-05 | State (L2) | NEU.EXC_IT.structural | neuron | NEU.EXC_IT | AHI1, AKAP8, ANKRD20A1, EPB41L2, ANKRD36B, AP1G2, CDK11A, CHD5, CSNK2A3, GOLGA8B, HYDIN, NPIPA1, NPIPB13, PILRA, PUM3 |
| C24-02-06 | State (L2) | NEU.EXC_IT.transitional | neuron | NEU.EXC_IT | CADPS2, CAMK2D, CASC15, DPY19L1, ETV1, FNBP1L, IPCEF1, PCP4, SNCG, TLL1, TRABD2A |
| C24-03-01 | State (L2) | NEU.EXC_NTNG1.nuclear_reg | neuron | NEU.EXC_NTNG1 | AADAT, ANKRD20A1, ANKRD36B, EFCAB5, GOLGA8B, JAKMIP3, LINC00342, MYO9B, NPIPA1, NPIPB13, NUP210, RGPd5, USP40, ZNF701 |
| C24-03-02 | State (L2) | NEU.EXC_NTNG1.synaptic | neuron | NEU.EXC_NTNG1 | APP, ATP1B1, BASP1, CALM1, CALM2, CHGA, CHN1, CLU, EIF4G2, HSP90AA1, ITM2B, OLFM1, PTMA, REEP5, SNAP25, TSC22D1, VAMP2, YPEL3, YWHAH |
| C24-04-01 | State (L2) | NEU.EXC_SYT2.nuclear_reg | neuron | NEU.EXC_SYT2 | AHI1, ALMS1, AMY2B, ANKRD36B, ANKRD36C, ARGLU1, CDK11A, CSPP1, DIAPH2, FNBP4, FSIP1, FTCD, GOLGA8B, LINC-PINT, MAN2C1, MEG8, MIPOL1, MOK, NAA16, NIN, NPIPB12, NPIPB13, NPIPB3, NPIPB4, NPIPB5, PAXBP1, PILRA, PVT1, RNPC3, SNTG1, SRRM3, TTC14, TTC21B, UBAP1L, VWA3A, ZRANB2 |
| C24-04-02 | State (L2) | NEU.EXC_SYT2.synaptic | neuron | NEU.EXC_SYT2 | ALDOA, APLP2, ARF1, ATP6V0E2, CALM1, CALM2, CALM3, CFL1, CLSTN1, ENO1, GAPDH, MAP1B, NAPB, NDRG4, NDUFA4, NEFL, NEFM, NGRN, NORAD, NRGN, PGAM1, PHYHIP, PINK1, PKM, PPIA, PRNP, RAB3A, RGS4, RPL15, RTN3, SERINC1, SLC17A7, SNAP25, SNCB, STMN2, THY1, TOMM20, TPRG1L, VAMP2, VSNL1, YWHAB |
| C24-05-01 | State (L2) | NEU.INH_LAMP5.exc_inh_balance | neuron | NEU.INH_LAMP5 | ABCA6, ABCA7, AHI1, ANKRD26, ANKRD36B, AP1G2, CA3, CCDC144A, CCDC40, CSNK2A3, DNAAF4, DNAH6, EHMT1, GRIA2, HELLS, LINC00342, LINC02082, MPPE1, MRPL41, PDIA2, PILRA, PLA2G4B, SOX6, SPAG5, SPH8, SPIDR, ST8SIA1, TEC |
| C24-05-02 | State (L2) | NEU.INH_LAMP5.glial_interface | neuron | NEU.INH_LAMP5 | APOE, CDH18, GFAP, KHDRBS3, PBX1, PBX3, ZBTB20 |
| C24-05-03 | State (L2) | NEU.INH_LAMP5.projecting | neuron | NEU.INH_LAMP5 | ATRNL1, CALB1, CHST9, EPHB6, GAP43, GLT8D2, LHX6, NPPC, NRP2, OPCML, OPRM1, RALYL, SEMA6D, SMYD3, TIMP2, TMEM255A, UNC5D |
| C24-05-04 | State (L2) | NEU.INH_LAMP5.rosehip | neuron | NEU.INH_LAMP5 | AP1S2, CCK, CPLX3, DIRAS2, DNER, GAS7, KIT, PAIP2, PDP1, PHYHIPL, PLCXD3, RAB3C, SCG2, SKP1, TMOD2, TSC22D1 |
| C24-06-01 | State (L2) | NEU.INH_PVALB.chandelier | neuron | NEU.INH_PVALB | ADGRG6, BCL11A, DMD, EDNRA, EPB41L2, FAM89A, GRIK1, KLF5, MAN1A1, MCUB, NELL1, NMU, PDE1A, POU3F3, PTPRR, RCAN3, RELN, RGS6, ROBO2 |
| C24-06-02 | State (L2) | NEU.INH_PVALB.fastspike | neuron | NEU.INH_PVALB | ACSL3, ATP1A1, ATP1B1, ATRNL1, C1QL1, COX6A1, DPP10, EPB41L3, ERBB4, GABRA1, GAD2, KCNC2, LANCL1, LBH, MDH1, SLC6A1, SNCB, SPARCL1, TSC22D1, VSNL1, YWHAB |
| C24-06-03 | State (L2) | NEU.INH_PVALB.metabotropic | neuron | NEU.INH_PVALB | BRINP3, CDH2, CDH8, DPY19L1, EPHA5, FAT1, FBN2, GDA, GRID2, GRM1, KCNT2, LRRC7, NDST4, NPAS1, NPAS3, NPY1R, PSD3, PTPRO, RALYL, SH3GL3, SLC8A1, SPON1, TBL1X, THSD7B |
| C24-06-04 | State (L2) | NEU.INH_PVALB.neuromodulatory | neuron | NEU.INH_PVALB | ALKAL2, CHRNA2, CHRNA6, CREB5, DPYSL3, FRAS1, HDAC9, HSPB8, IFI6, ISLR2, JUN, LGR5, NEAT1, NUPR1, PIK3R1, PLCXD3, PTGDS, RIT2, SHISA8, SLC2A13, SLC7A7, SLIT3, SPX, SVIL, SYT4 |
| C24-06-05 | State (L2) | NEU.INH_PVALB.nuclear_reg | neuron | NEU.INH_PVALB | ABCA6, AHI1, ANKRD18A, ANKRD20A1, EPB41, LINC00342, NPIPB13, SCX, XIST |
| C24-06-06 | State (L2) | NEU.INH_PVALB.serotonergic | neuron | NEU.INH_PVALB | B3GLCT, BCHE, COL18A1, CSMD3, FXYD6, GPC5, GULP1, HTR2A, KCNIP4, KIRREL1, LAYN, MAML3, NCAM2, NKAIN2, NT5DC3, PNMA6F, PTPRK, SASH1, SEMA3C, SNCA, ST6GAL2, SULF2, TCF12, TH, TMTC2, TRPM3, WSCD1 |
| C24-07-01 | State (L2) | NEU.INH_VIP.cannabinoid | neuron | NEU.INH_VIP | CNR1, GABRG1, PCLO, PDLIM5, RUNX2, RXFP1, SLC17A8 |
| C24-07-02 | State (L2) | NEU.INH_VIP.canonical_disinhibitory | neuron | NEU.INH_VIP | GALNT17, NELL1, NELL2, PCDH19, PROS1, PTH2R, RGS6, VIP |
| C24-07-03 | State (L2) | NEU.INH_VIP.develop_niche | neuron | NEU.INH_VIP | CDH23, CDH4, COL24A1, ITGB8, NXPH1, PAX6, PCSK6, SLC8A1, SPHKAP |
| C24-07-04 | State (L2) | NEU.INH_VIP.enkephalinergic | neuron | NEU.INH_VIP | ADAMTSL1, DACH2, LMO3, LMO4, PCDH18, PENK, SEMA3C, SOX5 |
| C24-07-05 | State (L2) | NEU.INH_VIP.excitatory_coupled | neuron | NEU.INH_VIP | ALCAM, CNTNAP2, EDIL3, GRIN2A, RGS4, SNCG |
| C24-07-06 | State (L2) | NEU.INH_VIP.LAMP5_hybrid | neuron | NEU.INH_VIP | COL5A2, LAMP5, NDNF, PDGFD, RELN, SST, SV2C, TOX3 |
| C24-07-07 | State (L2) | NEU.INH_VIP.matrix | neuron | NEU.INH_VIP | CDH9, COL16A1, COLQ, CXCL14, EPHB6, FSTL5, GRIK4, IQCA1 |
| C24-07-08 | State (L2) | NEU.INH_VIP.nuclear_reg | neuron | NEU.INH_VIP | ANKRD20A1, ARPP21, CACNA1A, CCDC144A, CMYA5, COL11A1, COL7A1, LINC00342, LINC00951, NPIPB13, PILRA, REV1 |
| C24-07-09 | State (L2) | NEU.INH_VIP.opioid | neuron | NEU.INH_VIP | CDH8, CLSTN2, CNTNAP5, CRH, CRHR2, LCP2, MIR4435-2HG, OPRK1, OPRM1, PLCE1, RXRG, TRH, TRPC6 |
| C24-07-10 | State (L2) | NEU.INH_VIP.regulatory_remodeling | neuron | NEU.INH_VIP | B3GLCT, CDH6, CMTM8, EREG, LUZP2, SLITRK4, THBS1, ZBTB20 |
| C24-07-11 | State (L2) | NEU.INH_VIP.serotonergic | neuron | NEU.INH_VIP | FLT1, HTR1E, HTR2C, IGFBP5, PCDH7, RYR3, SYT2 |
| C25-00-01 | State (L2) | OLG.myelinating_mature | oligodendrocyte | OLG.oligodendrocyte | APP, CD9, CNP, GPRC5B, LAMP2, MAL, NDRG2, OPALIN, PLLP, QDPR, RNASE1, SPOCK1, SUN2 |
| C25-00-02 | State (L2) | OLG.myelinating_stress | oligodendrocyte | OLG.oligodendrocyte | HSPE1 |
| C25-00-03 | State (L2) | OLG.reactive_repair | oligodendrocyte | OLG.oligodendrocyte | TUBA1B, PEA15, TUBA1A, TUBB2B, DHCR24, TNFRSF21, S100A1, MARCKSL1, TUBB, SCCPDH, PLIN3, UCHL1, KIF1A, S100B, LGALS1, RHOB, MAP1B |
| C25-00-04 | State (L2) | OLG.regulatory | oligodendrocyte | OLG.oligodendrocyte | ANK3, CALD1, CCDC88A, CD22, ENOSF1, ERBIN, FRMD4B, KCNH8, KNOP1, LCNL1, MPHOSPH8, NPIPB5, PAXBP1, SIK3, SPECC1, SRRM2 |
| C25-00-05 | State (L2) | OLG.regulatory_activated | oligodendrocyte | OLG.oligodendrocyte | SGK1 |
| C25-00-06 | State (L2) | OLG.stress | oligodendrocyte | OLG.oligodendrocyte | HSPA1A, HSPA1B |
| C25-00-07 | State (L2) | OLG.vesicle_trafficking | oligodendrocyte | OLG.oligodendrocyte | PI4K2B |
| C26-00-01 | State (L2) | OPC.homeostatic | oligodendrocyte_precursor_cell | OPC.oligodendrocyte_precursor_cell | AFDN, AHI1, ANKRD36B, ARPP21, CACNA1A, CALD1, CAPN8, CCDC136, CCDC88A, CHD9, CMYA5, CPEB4, DDX46, EHMT1, GOLGA8A, GOLGA8B, LUC7L3, MACF1, MPHOSPH8, N4BP2L2, NPIPB12, NPIPB13, NPIPB3, NPIPB4, NPIPB5, PLEKHH2, SRRM2, TAOK3, ZNF532 |
| C26-00-02 | State (L2) | OPC.premyelinating | oligodendrocyte_precursor_cell | OPC.oligodendrocyte_precursor_cell | ACTB, ACTG1, ALDOA, APOD, ATP1B2, BCAN, CD81, CNP, CPE, CSPG4, CSPG5, DNER, EDIL3, ENO1, GPNMB, GPR37L1, HSPA8, HTRA1, ITM2B, ITM2C, LY6H, NLGN3, PCDHGC3, PLLP, PSAP, RTN3, SARAF, SCD5, SLC22A17, SMOC1, TSPAN7 |
| C26-00-03 | State (L2) | OPC.proliferative_immune_interact | oligodendrocyte_precursor_cell | OPC.oligodendrocyte_precursor_cell | B2M, BEST3, CCND1, CD82, CDH19, HLA-A, HLA-B, HLA-C, ITM2A, MT3 |
| C27-00-01 | State (L2) | PERI.angiocrine | pericyte | PERI.pericyte | CD55, CD69, EZR, FAM107B, FGL2, GABARAPL1, HOOK2, KCNN4, KLF3, LMNA, MCL1, METRNL, PNRC1, RAB11FIP1, S100A10, TNFSF12A, UBE2H, ZNF267 |
| C27-00-02 | State (L2) | PERI.baseline | pericyte | PERI.pericyte | ACADVL, ANKRD36B, ATXN2L, CDK14, CREBZF, CROCC, EDEM3, GAB1, GOLGA8B, LINC00412, MALAT1, NEAT1, PHKB, RAPGEF1, RBM6, SENP2, SIAH2-AS1, SLC38A2, STAT2, XIST, ZBTB20 |
| C27-00-03 | State (L2) | PERI.cardiac_skeletal | pericyte | PERI.pericyte | ARPC2, BTF3, CYBA, DERL1, ERGIC3, ETFB, FAU, GRN, IFI30, ITM2C, NDUFAF4, NDUFC2, PRDX4, PSME2, RACK1, REEP5, RPL10, RPL11, RPL21, RPL23A, RPL26, RPL3, RPL30, RPL32, RPL8, RPN2, RPS15, RPS15A, RPS18, RPS21, RPS27, RPS27A, TNFRSF17, TXNDC15, UBA52, UBE2J1 |
| C27-00-04 | State (L2) | PERI.inflammatory | pericyte | PERI.pericyte | BAG3, DNAJA1, DUSP1, GADD45B, HSPA6, HSPB1, HSPD1, HSPH1, IER5, TECR, UBE2S, ZFAND2A |
| C28-01-01 | State (L2) | PC.IgA_muocsal.activated | plasma_cell | PC.IgA_muocsal | AGT, ANG, APOD, PPP1R14A, SPARCL1 |
| C28-01-02 | State (L2) | PC.IgA_muocsal.baseline | plasma_cell | PC.IgA_muocsal | ABCC9, COL4A1, COL4A2, CSPG4, DES, KCNJ8, MCAM, NOTCH3, PDGFRB, RGS5 |
| C28-01-03 | State (L2) | PC.IgA_muocsal.migratory | plasma_cell | PC.IgA_muocsal | ARGLU1, CD38, CLMN, DDX17, DLC1, LINC-PINT, MUC3A, NEAT1, NR2F2-AS1, PDE7B, PDGFRB, RGL3, RIPOR3, SLC16A12, SOX5, TNS2, ZBTB20, ZRANB2 |
| C28-01-04 | State (L2) | PC.IgA_muocsal.plasmablast | plasma_cell | PC.IgA_muocsal | ADAMTS1, ATF3, CCL2, CDKN1A, CEBPD, EGR1, FOS, GADD45B, HSPA1B, IRF1, JUN, JUNB, MT1A, MT2A, NR4A1, PPP1R15A, SERTAD1, SLC2A3, SOCS3, ZFP36 |
| C28-02-01 | State (L2) | PC.IgG_systemic.interacting | plasma_cell | PC.IgG_systemic | BTG2, DUSP2, EGR1, FOS, FOSB, GADD45B, IER3, JUN, JUNB, NFKBIA, PPP1R15A, TECR, UBB, ZFP36 |
| C28-02-02 | State (L2) | PC.IgG_systemic.metabolic | plasma_cell | PC.IgG_systemic | IGHA1, IGHA2, IRF4, JCHAIN, MZB1, PRDM1, SDC1, TNFRSF17, XBP1 |
| C28-02-03 | State (L2) | PC.IgG_systemic.secretory | plasma_cell | PC.IgG_systemic | AHNAK, ANXA2, CALM2, CD55, CLIC1, CRIP1, EZR, FXYD5, LMNA, MYADM, MYL12A, PERP, S100A10, S100A11, S100A4, S100A6, TAGLN2, TSC22D3, TUBA1A, TUBA1B, VIM, YWHAZ |
| C28-02-04 | State (L2) | PC.IgG_systemic.stress | plasma_cell | PC.IgG_systemic | CHST2, COTL1, CXCR4, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRA, HLA-DRB1, HLA-DRB5, MYBL2, RFTN1 |
| C29-00-01 | State (L2) | PLAT.adhesion | platelet | PLAT.platelet | CD151, CD9, CDK2AP1, CFL1, CST3, FHL1, FKBP8, FLNA, GSN, ITGB1, MYL9, PARVB, PPDPF, PSAP, SH3BGRL, TRAPPC1, TUBA1B |
| C29-00-02 | State (L2) | PLAT.megakaryocytic | platelet | PLAT.platelet | AKIRIN2, CCNG1, CFLAR, ELF1, FAM110A, GATA1, GMFG, HEMGN, HHEX, IFRD1, KCNA3, LGALS12, LYL1, MAP4K5, NFE2, NT5C3A, PCYT1B, PSTPIP2, QKI, RAB27B, RAB32, RAP2B, RASGRP2, RBM38, RGS3, SEC14L1, SMOX, SNHG7, SSX2IP, TECPR2, TMEM140, TSC22D1, TXNL4B, UBALD2 |
| C30-00-01 | State (L2) | SCHWN.axon_contact_cardiac | schwann_cell | SCHWN.schwann_cell | ANK3, DDX17, DST, EPB41L2, HSPA12A, MALAT1, NRXN1, NRXN3, XKR4, ZEB2 |
| C30-00-02 | State (L2) | SCHWN.reactive_inflammatory | schwann_cell | SCHWN.schwann_cell | ATF3, CCL2, CEBPD, CRYAB, EGR1, IER3, MAFF, NR4A1, RCAN1, SERTAD1 |
| C30-00-03 | State (L2) | SCHWN.translation_boost | schwann_cell | SCHWN.schwann_cell | RPL11, RPL22, RPL30, RPL34, RPL36, RPL37, RPS10, RPS21, RPS27A, RPS8 |
| C31-01-01 | State (L2) | SKM.type_1_slow.contractile | skeletal_muscle_cell | SKM.type_1_slow | ABRA, BTG2, LGR5, LMOD2, PPP1R27, TXNIP, XIRP2 |
| C31-01-02 | State (L2) | SKM.type_1_slow.glycolytic | skeletal_muscle_cell | SKM.type_1_slow | ACTN3, ATP2A1, COL4A3, ENO3, G0S2, LDHA, MYBPC2, MYH2, MYL1, MYLK4, PFKFB3, PFKM, PGM1, PKM, SLC16A3, TNNC2, TNNI2, TNNT3, TPM1, TPRG1 |
| C31-01-03 | State (L2) | SKM.type_1_slow.oxidative | skeletal_muscle_cell | SKM.type_1_slow | ABLIM1, ACADVL, ASB5, BICD1, CA3, CD36, ESRRG, EXOC6, FEZ2, LGI1, LINC01091, LINC01405, MYL2, MYOM2, MYOZ2, PPP1R1C |
| C31-02-01 | State (L2) | SKM.type_2_fast.glycolytic_IIx_IIb | skeletal_muscle_cell | SKM.type_2_fast | ACTN3, ALDOA, IL32, MYBPC2, MYH1, MYHAS, MYLK2, MYLK4, PRKAG3 |
| C31-02-02 | State (L2) | SKM.type_2_fast.oxidative_IIa | skeletal_muscle_cell | SKM.type_2_fast | CD36, FGD4, MYH2 |
| C32-00-01 | State (L2) | SMC.activated | smooth_muscle_cell | SMC.smooth_muscle_cell | ADAMTS4, ATF3, ATP1B3, BTG2, CDKN1A, CREM, CRISPLD2, CYCS, DNAJB1, DNAJB9, EGR1, EIF4A3, FOS, FOSB, GLA, HSPA1A, HSPA1B, IGFBP5, IL6, JUN, MAT2A, MIR22HG, MT1A, NAMPT, RBKS, SNHG15, YBX3, ZNF331 |
| C32-00-02 | State (L2) | SMC.contractile | smooth_muscle_cell | SMC.smooth_muscle_cell | ACTA2, CNN1, CSRP1, FILIP1L, LPP, MACF1, MYH11, PALLD, PDLIM3, PDLIM5, PPP1R12B, SLMAP, SORBS1, SORBS2, SVIL, SYNPO2, TPM1, TPM2 |
| C32-00-03 | State (L2) | SMC.metabolic | smooth_muscle_cell | SMC.smooth_muscle_cell | ABCC9, ARHGDIB, CD36, CYGB, DLC1, FABP4, FABP5, FRMD3, FXYD6, HIGD1B, HLA-B, IFITM1, IGF2, MYO1B, PLA2G5, RGS5, STEAP4, TCF4, TESC, TFPI, THY1 |
| C33-01-01 | State (L2) | T.CD4_cytotoxic.activated | T_cell | T.CD4_cytotoxic | BHLHE40, CREM, CXCR4, DNAJB6, ENC1, METRNL, PIK3R1, PPP1R16B, SELENOK, SKIL, SYTL3, TNFAIP3 |
| C33-01-02 | State (L2) | T.CD4_cytotoxic.baseline | T_cell | T.CD4_cytotoxic | GNLY, GZMA, GZMH, KLRG1 |
| C33-01-03 | State (L2) | T.CD4_cytotoxic.NK_adapted | T_cell | T.CD4_cytotoxic | CCL4, CCL4L2, FCGR3A, IFNG, KLRC4, KLRD1, KLRK1, LAG3, TNF, XCL2 |
| C33-01-04 | State (L2) | T.CD4_cytotoxic.precursor | T_cell | T.CD4_cytotoxic | AQP3, BEX2, CD27, CD28, CXCR3, GPR183, GZMK, IL7R, LDHB, LEF1, LTB, MYC, TCF7 |
| C33-01-05 | State (L2) | T.CD4_cytotoxic.terminal_effector | T_cell | T.CD4_cytotoxic | ACTR3, CAP1, CASP1, CTSC, CTSW, CX3CR1, GBP5, GIMAP4, PLEK, TBX21, TPM4, WDR1, ZNF683 |
| C33-02-01 | State (L2) | T.CD4_naive.activated_stress | T_cell | T.CD4_naive | ATF3, CSRNP1, RGS1, TNFAIP3, YPEL5 |
| C33-02-02 | State (L2) | T.CD4_naive.gut_prone | T_cell | T.CD4_naive | CCR9, SOX4, TOX2 |
| C33-02-03 | State (L2) | T.CD4_naive.homeostatic | T_cell | T.CD4_naive | AK6, TAF9 |
| C33-02-04 | State (L2) | T.CD4_naive.mature | T_cell | T.CD4_naive | CCR7, IL7R, LEF1, SELL, TCF7 |
| C33-02-05 | State (L2) | T.CD4_naive.mature_mitoprot | T_cell | T.CD4_naive | HSPE1 |
| C33-02-06 | State (L2) | T.CD4_naive.neddylation | T_cell | T.CD4_naive | UBE2F |
| C33-02-07 | State (L2) | T.CD4_naive.neddylation_mitoprot | T_cell | T.CD4_naive | HSPE1, UBE2F |
| C33-02-08 | State (L2) | T.CD4_naive.proteostasis | T_cell | T.CD4_naive | FASTKD5, UBOX5 |
| C33-02-09 | State (L2) | T.CD4_naive.proteostasis_mitoprot | T_cell | T.CD4_naive | FASTKD5, HSPE1, UBOX5 |
| C33-02-10 | State (L2) | T.CD4_naive.purinergic | T_cell | T.CD4_naive | P2RX5 |
| C33-02-11 | State (L2) | T.CD4_naive.resist_bystander | T_cell | T.CD4_naive | LINC01118, SOCS5, ZNF816 |
| C33-02-12 | State (L2) | T.CD4_naive.survival | T_cell | T.CD4_naive | CMC4, MTCP1 |
| C33-02-13 | State (L2) | T.CD4_naive.survival_mitoprot | T_cell | T.CD4_naive | CMC4, HSPE1, MTCP1 |
| C33-02-14 | State (L2) | T.CD4_naive.survival_neddylation | T_cell | T.CD4_naive | CMC4, MTCP1, UBE2F |
| C33-02-15 | State (L2) | T.CD4_naive.Treg_like | T_cell | T.CD4_naive | CEACAM4, EGR1, FCRL3, FOXP3, FXYD2, IL2RB, LAIR2, RTKN2, TIGIT |
| C33-03-01 | State (L2) | T.CD4_Tcm.APC_mimicry | T_cell | T.CD4_Tcm | CD74, HLA-DMA, HLA-DPA1, HLA-DPB1, HLA-DQB1, HLA-DRA, HLA-DRB1, HLA-DRB5 |
| C33-03-02 | State (L2) | T.CD4_Tcm.baseline | T_cell | T.CD4_Tcm | CCR7, CXCR4, IL7R, KLF2, LEF1, S1PR1, SELL, TCF7 |
| C33-03-03 | State (L2) | T.CD4_Tcm.crosstalk_myeloid | T_cell | T.CD4_Tcm | ANXA1, CD55, CISH, GREM2, LMNA, PTGER2 |
| C33-03-04 | State (L2) | T.CD4_Tcm.DC_interact | T_cell | T.CD4_Tcm | LY75 |
| C33-03-05 | State (L2) | T.CD4_Tcm.effector_like | T_cell | T.CD4_Tcm | CCL5, CST7, CXCR3, GZMA, GZMK, IFNG, NKG7, PRF1, TBX21 |
| C33-03-06 | State (L2) | T.CD4_Tcm.imprinted_splicing | T_cell | T.CD4_Tcm | SNRPN, SNURF |
| C33-03-07 | State (L2) | T.CD4_Tcm.migratory_cilium | T_cell | T.CD4_Tcm | NPHP3 |
| C33-03-08 | State (L2) | T.CD4_Tcm.regulatory_poised | T_cell | T.CD4_Tcm | BCL3, CCR6, CDKN1A, CREM, NFKBIA, NR4A2, PDE4D |
| C33-03-09 | State (L2) | T.CD4_Tcm.retro_ZNF117 | T_cell | T.CD4_Tcm | ERV3-1, ZNF117 |
| C33-03-10 | State (L2) | T.CD4_Tcm.RNA_control | T_cell | T.CD4_Tcm | TSNAX |
| C33-03-11 | State (L2) | T.CD4_Tcm.secretory | T_cell | T.CD4_Tcm | ADAT3, SCAMP4 |
| C33-03-12 | State (L2) | T.CD4_Tcm.stress | T_cell | T.CD4_Tcm | AIF1, HSPE1 |
| C33-03-13 | State (L2) | T.CD4_Tcm.synapse_dynamics | T_cell | T.CD4_Tcm | SPECC1L |
| C33-03-14 | State (L2) | T.CD4_Tcm.Tfh_like | T_cell | T.CD4_Tcm | CXCR5, ITGA4, KLRB1, MAF |
| C33-03-15 | State (L2) | T.CD4_Tcm.Th2_like | T_cell | T.CD4_Tcm | CCR4, CCR8, DENND1C, FHIT, GATA3, NINJ2, NR3C1 |
| C33-03-16 | State (L2) | T.CD4_Tcm.tissue_homing | T_cell | T.CD4_Tcm | CCR10, CD63, CLU, FUT7, LGALS1, LGALS3, PI16 |
| C33-04-01 | State (L2) | T.CD4_Tem.cytotoxic_effector | T_cell | T.CD4_Tem | CCL4, CCL5, CD74, CRTAM, CST7, CTSW, EOMES, GZMK, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DRB1, KLRD1, KLRK1, NKG7, PLEK, PRF1, TNFSF9, ZEB2 |
| C33-04-02 | State (L2) | T.CD4_Tem.inflammatory | T_cell | T.CD4_Tem | ALOX5AP, ANXA1, ARPC4, ATP1B1, CAPG, CLU, GZMA, HOPX, LGALS1, PHLDA1, S100A10, S100A11, S100A4, S100A6 |
| C33-04-03 | State (L2) | T.CD4_Tem.long_term_memory | T_cell | T.CD4_Tem | IL7R |
| C33-04-04 | State (L2) | T.CD4_Tem.transitional_CM | T_cell | T.CD4_Tem | CCR7, CXCR5, LEF1, SELL, TCF7 |
| C33-05-01 | State (L2) | T.CD4_Tfh.canonical_GC_helper | T_cell | T.CD4_Tfh | CD200, CHI3L2, CNIH1, CXCR5, DRAIC, GNG4, MAGEH1, PASK, POU2AF1, SH2D1A, SMCO4, TIGIT, TOX, TOX2 |
| C33-05-02 | State (L2) | T.CD4_Tfh.effector_migratory | T_cell | T.CD4_Tfh | ANXA2, CD52, CORO1A, EMP3, GZMA, HLA-DRB1, MYL12A, MYL12B, PSME1, S100A10, S100A4, S100A6, SH3BGRL3, VIM |
| C33-05-03 | State (L2) | T.CD4_Tfh.precursor_migratory | T_cell | T.CD4_Tfh | CCR7, CHMP1B, CMTM8, CXCR4, DNAJB1, FAM177A1, FOS, FOSB, GPR183, IFRD1, IL7R, KLF6, MAL, MORF4L2, PER1, SF1, SNHG8, SOCS3, SPRY1, SRSF7, WDR74, YPEL5, ZFAS1 |
| C33-05-04 | State (L2) | T.CD4_Tfh.suppression_exhaustion | T_cell | T.CD4_Tfh | CD38, CTLA4, ENTPD1, LAG3, LGMN, LINC01229, LINC01943, METRNL, MIR4435-2HG, PRDM1, PTMS, SH2D2A, SNX9, TNFRSF18, UCP2, ZBTB32, ZEB2 |
| C33-06-01 | State (L2) | T.CD4_Th17.baseline | T_cell | T.CD4_Th17 | AQP3, BATF, CCR6, FUT7, KLRB1, RORC, STAT3, USP10 |
| C33-06-02 | State (L2) | T.CD4_Th17.cytotoxic | T_cell | T.CD4_Th17 | CCL5, CD74, CEBPD, CMC1, CST7, CTSW, CXCR3, CXCR6, DUSP2, EFHD2, EOMES, GNLY, GYG1, GZMA, GZMH, GZMK, GZMM, HCST, HLA-DPA1, HLA-DPB1, HLA-DRB1, ID2, IFNGR1, KLRG1, MAP3K8, MATK, MYBL1, NKG7, PARP8, PLEK, PRF1, PVRIG, RFLNA, S1PR5, SAMD3, SLAMF7, SPON2, TBX21, ZNF664 |
| C33-06-03 | State (L2) | T.CD4_Th17.migratory | T_cell | T.CD4_Th17 | AQP3, CCR6, CCR7, LIMS1, PIM2, RNASET2, USP10 |
| C33-07-01 | State (L2) | T.CD4_Th2.precursor | T_cell | T.CD4_Th2 | ANXA2, CAMK4, CD2, CD3D, CD3E, CD3G, CD5, CD6, CD82, COTL1, FYB1, GSTK1, HPGDS, ISG20, LIME1, LITAF, MED15, PKM, PTGDR2, SIT1, TBC1D10C |
| C33-07-02 | State (L2) | T.CD4_Th2.tissue_adapted | T_cell | T.CD4_Th2 | ADAM15, BACE2, CD7, CFH, CTSD, FCRL3, FSTL4, FXYD7, HPGDS, HTR1F, IRS2, ITGAM, KLRB1, LSR, MSRB3, NPDC1, PLAGL1, PTGDR2, RBPMS, RNF144A, TPMT, TRIB2, ZNF22, ZNF775 |
| C33-08-01 | State (L2) | T.CD4_transitional.APC_interacting | T_cell | T.CD4_transitional | CCR10, CD74, CDC25B, FUT7, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DRA, HLA-DRB1, HLA-DRB5, ITGB1, SAMHD1 |
| C33-08-02 | State (L2) | T.CD4_transitional.baseline | T_cell | T.CD4_transitional | CCR7, CXCR3, IL7R, ITM2A, KLF2, LEF1, S1PR1, SELL, TCF7 |
| C33-08-03 | State (L2) | T.CD4_transitional.primed_cytotoxic | T_cell | T.CD4_transitional | ADRB2, APOBEC3G, CCL4, CCL5, CD74, CST7, FCRL6, GYG1, GZMA, GZMH, GZMK, HLA-DPA1, HLA-DPB1, HLA-DRB1, HOPX, IFNG, NKG7, XCL1, XCL2, ZNF683 |
| C33-08-04 | State (L2) | T.CD4_transitional.primed_helper_effector | T_cell | T.CD4_transitional | CD27, CORO1B, CTLA4, CXCL13, DNPH1, DRAIC, ICOS, ITM2A, KLRB1, LIMS1, PDCD1, PTTG1, SIRPG, SPOCK2, TBC1D4, TIGIT, TOX2 |
| C33-08-05 | State (L2) | T.CD4_transitional.tissue_enagement | T_cell | T.CD4_transitional | BATF, CAPG, CCR10, CD63, CTSA, HPGD, IL17RB, IL26, LGALS1, LGALS3, LINC02195, LMO4, MMP25, NCR3, PI16, PLD1, PLP2 |
| C33-09-01 | State (L2) | T.CD4_Treg.APC_interactive | T_cell | T.CD4_Treg | CCR10, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, LGALS1, LSP1, PI16, S100A11, TGFB1 |
| C33-09-02 | State (L2) | T.CD4_Treg.central_naive_like | T_cell | T.CD4_Treg | EEF1B2, TCF7 |
| C33-09-03 | State (L2) | T.CD4_Treg.tissue_effector | T_cell | T.CD4_Treg | BATF, CTLA4, CXCR6, DUSP2, IL1R2, NAMPT, TNFRSF18, TNFRSF4, TNFRSF9 |
| C33-09-04 | State (L2) | T.CD4_Treg.Tr1_like | T_cell | T.CD4_Treg | FCMR, FOXP1, GIMAP4, GPR25, KLRB1, MAF, NOSIP, POU2AF1, S1PR4, UCP2 |
| C33-10-01 | State (L2) | T.CD4_Trm.activated | T_cell | T.CD4_Trm | BRD2, BTG2, CD69, CITED2, DUSP1, EGR1, FOS, FOSB, GADD45B, IER3, JUN, KLF6, NFKBIA, PPP1R15A, RASD1, SERTAD1, TNF, TNFAIP3, ZFP36L1 |
| C33-10-02 | State (L2) | T.CD4_Trm.baseline | T_cell | T.CD4_Trm | METRNL, CREM, THBS1, MYADM, ATP1B3, TIPARP, PMEPA1, LMNA, FTH1, ANKRD9, ANXA1, CCR9, RGCC, VPS37B, SRGN, ELL2, CXCR3, CD69, RUNX3 |
| C33-10-03 | State (L2) | T.CD4_Trm.central_like | T_cell | T.CD4_Trm | CCR4, CCR7, CD55, DCXR, FAAH2, KLF3, LDHB, LEF1, PASK, S1PR1, SCML1, SELL, SESN3, TSHZ2 |
| C33-10-04 | State (L2) | T.CD4_Trm.cytotoxic_effector | T_cell | T.CD4_Trm | CCL5, CD7, CD74, CST7, CXCR3, DUSP4, GZMA, GZMH, GZMK, HCST, HLA-DRB1, HLA-DRB5, IL32, LGALS1, MT2A, MYL6, NKG7 |
| C33-10-05 | State (L2) | T.CD4_Trm.helper_like | T_cell | T.CD4_Trm | ABI3, ARPC4, IL4I1, KLRB1, LGALS3, LTB, OSTF1, PRR5, SIRPG, TMIGD2, ZNRF1 |
| C33-10-06 | State (L2) | T.CD4_Trm.metal_stress | T_cell | T.CD4_Trm | FKBP4, HLA-DQA1, HLA-DQA2, HSP90AB4, HSPA1A, HSPE1, MT1E, MT1F, MT1G, MT1X, MT2A, SERPINH1, SLC30A1, ZFAND2A |
| C33-10-07 | State (L2) | T.CD4_Trm.stress_adaptive | T_cell | T.CD4_Trm | ADGRE5, AHNAK, ANXA1, CRIP1, IDS, LMNA, LRRIFP1, MYADM, RGCC, TUBA1A, UCP2 |
| C33-11-01 | State (L2) | T.CD8_naive.baseline | T_cell | T.CD8_naive | CCR7, IL7R, KLF2, LEF1, LTB, SELL, TCF7 |
| C33-11-02 | State (L2) | T.CD8_naive.cytokine_dampened | T_cell | T.CD8_naive | AKNAD1, CLCC1, DNAJC25, SOCS5 |
| C33-11-03 | State (L2) | T.CD8_naive.effector_transition | T_cell | T.CD8_naive | ANXA2, CCL5, CST7, ITGB1, NKG7 |
| C33-11-04 | State (L2) | T.CD8_naive.innate_like | T_cell | T.CD8_naive | KLRC4 |
| C33-11-05 | State (L2) | T.CD8_naive.lipid_synthesis | T_cell | T.CD8_naive | CHKB |
| C33-11-06 | State (L2) | T.CD8_naive.mito_proteostasis | T_cell | T.CD8_naive | FASTKD5, SPECC1L, UBOX5 |
| C33-11-07 | State (L2) | T.CD8_naive.nfkb_related | T_cell | T.CD8_naive | ZFP91 |
| C33-11-08 | State (L2) | T.CD8_naive.splicing_enriched | T_cell | T.CD8_naive | CENPS, SRRM5, ZNF576 |
| C33-11-09 | State (L2) | T.CD8_naive.vesicle_secretory | T_cell | T.CD8_naive | RAB3D, TMEM205 |
| C33-12-01 | State (L2) | T.CD8_Tcm.baseline | T_cell | T.CD8_Tcm | CCR7, FCMR, GZMK, IFNG-AS1, LDLRAP1, LINC00861, NELL2, NUCB2, SELL, TGFBR2, TXK |
| C33-12-02 | State (L2) | T.CD8_Tcm.effector_bias | T_cell | T.CD8_Tcm | ADRB2, CCL4, CCL5, CD74, CST7, DUSP2, EFHD2, GZMA, GZMH, GZMK, GZMM, KLRG1, LAG3, NKG7, PLEK, PRF1, S1PR5, ZEB2 |
| C33-12-03 | State (L2) | T.CD8_Tcm.gut_homing | T_cell | T.CD8_Tcm | CCR9, CD248, CLIC3, HOPX, IGFBP3, ITGA1, ITGA4, ITM2C, KLRB1, KLRC1, NT5E, PELO, TMIGD2 |
| C33-12-04 | State (L2) | T.CD8_Tcm.helper_like | T_cell | T.CD8_Tcm | ANXA1, C1orf162, CAPG, CCR4, CD40LG, CRIP1, CRIP2, GATA3, GLIPR1, ITGB1, LGALS1, LPAR6, PLP2, S100A11 |
| C33-12-05 | State (L2) | T.CD8_Tcm.NK_like | T_cell | T.CD8_Tcm | AOAH, CD300A, CHST2, CNR2, CXXC5, FBLN2, FCRL6, ITGAM, KIR3DL2, KLRC2, KLRC3, KLRD1, NCR3, RTKN2, SOX4, SPRY2, VSIG4, XCL1, ZNF683 |
| C33-13-01 | State (L2) | T.CD8_Tem.baseline | T_cell | T.CD8_Tem | CCL5, CTSW, CX3CR1, GZMB, GZMK, HOPX, IFNG, KLRG1, NKG7, PRF1, S1PR5, ZEB2 |
| C33-13-02 | State (L2) | T.CD8_Tem.early_helper_like | T_cell | T.CD8_Tem | CD160, CD27, CMC1, COTL1, DENND2D, GCSAM, PECAM1, SH2D1A, TCF7 |
| C33-13-03 | State (L2) | T.CD8_Tem.motility_primed | T_cell | T.CD8_Tem | C4orf50, JAKMIP1 |
| C33-13-04 | State (L2) | T.CD8_Tem.signaling_turnover | T_cell | T.CD8_Tem | COMMD3 |
| C33-13-05 | State (L2) | T.CD8_Tem.stress_adapted | T_cell | T.CD8_Tem | HSPE1 |
| C33-13-06 | State (L2) | T.CD8_Tem.TEMRA | T_cell | T.CD8_Tem | CD63, CD7, GNLY, IFITM3, IKZF2, KIR2DL1, KIR2DL3, KIR3DL1, KIR3DL2, KLRC2, KLRC3, LAT2, NCR3, TXK, TYROBP |
| C33-14-01 | State (L2) | T.CD8_transitional.APC_like | T_cell | T.CD8_transitional | APOBEC3G, CD27, CD74, COTL1, GZMA, GZMK, HLA-DMA, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRA, HLA-DRB1, HLA-DRB5, ITM2A |
| C33-14-02 | State (L2) | T.CD8_transitional.early | T_cell | T.CD8_transitional | CCR7, CD55, FTH1, IL7R, PABPC1, YPEL5 |
| C33-14-03 | State (L2) | T.CD8_transitional.effector_primed | T_cell | T.CD8_transitional | CD160, CMC1, FCGR3A, FCRL6, FGR, KLRC2, KLRD1, KLRF1, S1PR5, SYTL3, XCL2, ZEB2 |
| C33-14-04 | State (L2) | T.CD8_transitional.stress | T_cell | T.CD8_transitional | BAG3, DNAJB4, EMP1, FKBP4, HSPA1A, HSPA1B, HSPA6, HSPE1, HSPH1, LMNA, MT1E, MT1F, MT1G, MT1X, MT2A, NR4A1, SLC30A1, ZFAND2A |
| C33-14-05 | State (L2) | T.CD8_transitional.Trm_primed | T_cell | T.CD8_transitional | CAPG, CD40LG, CD9, FXYD2, GNLY, HOPX, LGALS3, PHLDA1, TIMP1, TNFRSF18, ZNF683 |
| C33-15-01 | State (L2) | T.CD8_Trm.cytotoxic | T_cell | T.CD8_Trm | ARL2, C12orf75, GZMB, GZMH, LGALS1, LITAF, LSP1, NKG7, PRF1 |
| C33-15-02 | State (L2) | T.CD8_Trm.dendritic_recruiter | T_cell | T.CD8_Trm | CDKN1A, CRTAM, GZMK, HLA-DQA1, HLA-DRB1, HSPE1, MT2A, STMN1, TNFRSF9, XCL1, XCL2 |
| C33-15-03 | State (L2) | T.CD8_Trm.homeostatic | T_cell | T.CD8_Trm | ANXA1, EZR, IL7R, LMNA, MYADM, RGCC |
| C33-15-04 | State (L2) | T.CD8_Trm.inflammatory | T_cell | T.CD8_Trm | CCL3, CCL4, CCL4L2, DNAJB1, GADD45B, GZMK, HSPA1B, IER3, IFNG, RASD1, TAGAP, TNF |
| C33-15-05 | State (L2) | T.CD8_Trm.muscosal_Tc17 | T_cell | T.CD8_Trm | CCR6, CTLA4, ENTPD1, FSD1, IL17A, IL23R, KIR2DL4, LAYN, RORC, SIRPG, TMIGD2 |
| C33-16-01 | State (L2) | T.gamma_delta.central_memory | T_cell | T.gamma_delta | AQP3, CD27, CNN2, GZMK, LTB, TCF7 |
| C33-16-02 | State (L2) | T.gamma_delta.cytotoxic_effector | T_cell | T.gamma_delta | ADGRG1, CX3CR1, FCGR3A, FGFBP2, GNLY, GZMB, GZMH, LAIR2, LGALS1, PRF1, SPON2, ZNF683 |
| C33-16-03 | State (L2) | T.gamma_delta.early_effector | T_cell | T.gamma_delta | GNLY, IL7R |
| C33-17-01 | State (L2) | T.MAIT.cytotoxic | T_cell | T.MAIT | CCL4, CRIP1, GNLY, GZMB, GZMH, HLA-DPA1, HLA-DRB1, HLA-DRB5, KLRD1, KLRK1, LMNA, METRNL, MYADM, RGCC |
| C33-17-02 | State (L2) | T.MAIT.early_activation | T_cell | T.MAIT | EGR1, GADD45B, JUN, RAB4B |
| C33-17-03 | State (L2) | T.MAIT.MAPK_brake | T_cell | T.MAIT | DUSP2 |
| C33-17-04 | State (L2) | T.MAIT.migratory | T_cell | T.MAIT | CAPG, LGALS3, LPAR6 |
| C33-17-05 | State (L2) | T.MAIT.quiescent | T_cell | T.MAIT | GZMK, IL7R, KLRB1, RORA |
| C33-17-06 | State (L2) | T.MAIT.stress | T_cell | T.MAIT | DNAJB1, HSPA1A, HSPA1B, HSPD1, HSPH1 |
| C33-17-07 | State (L2) | T.MAIT.vesicle | T_cell | T.MAIT | ARL2 |
| C34-00-01 | State (L2) | THYMO.CD8aa_IELp | thymocyte | THYMO.thymocyte | CD27, CLEC2D, CNN2, COTL1, CST7, GNG4, HCST, ID3, IGFLR1, LCP2, LGALS1, NAB2, NFATC1, NMB, PPM1M, PRKCH, RTKN2, SH3BGRL3, TOX2 |
| C34-00-02 | State (L2) | THYMO.DN_preTCR | thymocyte | THYMO.thymocyte | ABHD14B, ALKBH7, ANXA1, APRT, BIK, BST2, CD7, CEP70, CLIP3, DNAJC4, EEF2, EVL, FRMD4A, FXYD2, GLIPR1, HES4, ID1, JCHAIN, KCTD9, KLF3, LINC01819, LITAF, LY6H, MAL, MAPK3, MEST, MFAP4, NACA, NCF4, NOP53, NR3C1, PCBP4, PFKFB2, PIGZ, PLIN3, PTCRA, RACK1, RGS1, RPL10, RPL12, RPL35A, RSL1D1, SMIM24, SMIM3, SNHG7, SOCS2, SPON2, YBX3 |
| C34-00-03 | State (L2) | THYMO.DP_early | thymocyte | THYMO.thymocyte | ADAM10, BCL6, CD38, CD4, CD8A, CD8B, CYP2U1, LBR, NUP155, PTPRC, RAG1, SELENOI, SLC16A2 |
| C34-00-04 | State (L2) | THYMO.DP_early_stress | thymocyte | THYMO.thymocyte | ATP2C1, BAG3, CHORDC1, DNAJA4, DNAJB1, DNAJB4, DUSP1, FAM13A, HSPA1A, HSPA1B, HSPA6, HSPD1, HSPH1, MXD1, SERPINH1, TAGAP, TNFAIP3, TSPYL2, TXNIP, USPL1 |
| C34-00-05 | State (L2) | THYMO.proliferative_G2M | thymocyte | THYMO.thymocyte | ANLN, ASPM, BUB1B, CIT, HSP90B1, KIF14, KNL1, KNTC1, LBR, MKI67, NUP155, PRKDC, SELENOI, SLC20A1, SYNE2, ZGRF1 |
| C34-00-06 | State (L2) | THYMO.proliferative_S | thymocyte | THYMO.thymocyte | ANP32B, CALM3, CARHSP1, CDT1, CENPM, CENPU, CENPW, CFL1, CKS2, COX8A, DDX39A, DEK, DNAJC9, DUT, ERH, HMGA1, HMGB1, HMGB2, HMGB3, HMGN2, HNRNPAB, HNRNPF, LMNB1, LSM4, MAD2L1, MAD2L2, MCM7, NUCKS1, NUDT1, PCLAF, PCNA, PFN1, PRDX2, PSIP1, PTMA, RAN, RANBP1, RPA3, SIVA1, SNRPB, SNRPG, STMN1, TUBA1B, TUBB, TYMS, U2AF1, USP1, YBX1, ZWINT |
| C34-00-07 | State (L2) | THYMO.SP_CD4_naive | thymocyte | THYMO.thymocyte | ABLIM1, BACH2, CCR4, CD27, CD28, CD44, CLDN1, GZMM, HLA-E, HSP90B1, ID3, ITM2A, LBR, LY9, NUP155, SELENOI, SIRPG, ST6GAL1, SYTL2, TOX2 |
| C34-00-08 | State (L2) | THYMO.SP_CD8_naive | thymocyte | THYMO.thymocyte | ADORA2A, AQP3, BBC3, BTG1, BTG2, CCDC107, CD1C, CD52, CD8A, CD8B, CD9, CLIC3, CPLX1, EEPD1, ELOVL4, FBXL12, FLT3LG, HRK, IL32, ISCU, ISG20, ITM2C, LBH, LINC02273, LTB, PIM2, PTMA, PTPRCAP, RASSF6, RCSD1, SIT1, SNX20, STXBP2, VOPP1, YPEL3 |
| C34-00-09 | State (L2) | THYMO.SP_CD8_naive_stress | thymocyte | THYMO.thymocyte | CACYBP, DNAJB1, DNAJB4, FKBP4, GADD45B, HSP90AA1, HSP90AB1, HSPA1A, HSPA1B, HSPA6, HSPB1, HSPE1, HSPH1, SERPINH1, TAGAP, ZFAND2A |
| C34-00-10 | State (L2) | THYMO.SP_CD8_transitional | thymocyte | THYMO.thymocyte | CDH2, CR2, DANT2, HSP90B1, JAM3, MME, NUP155, SCN3A, SELENOI, TMEM131L |