@import url("browser-links.css?v=20261023-original-icon-colors-v1");

/*
 * Shared SCREATE visual language.
 *
 * Keep selectors namespaced to .screate-* or an explicit body page class.
 * The landing pages and JBrowse load these shared tokens. The Cell Browser
 * mirrors the same token block in its own stylesheet so its source/rebuild
 * snapshot remains a self-contained release.
 */
:root {
  --screate-paper: #f7f5ef;
  --screate-panel: #fffefb;
  --screate-ink: #172321;
  --screate-muted: #64727e;
  --screate-line: #dce3df;
  --screate-accent: #086f69;
  --screate-accent-dark: #07544f;
  --screate-accent-soft: #dcefeb;
  --screate-amber: #d9911e;
  --screate-control-line: #cbd7d2;
  --screate-shadow: 0 2px 10px rgba(23, 35, 33, 0.07);
  --screate-font-sans: ui-sans-serif, system-ui, -apple-system,
    BlinkMacSystemFont, "Segoe UI", sans-serif;
  --screate-font-display: Georgia, "Times New Roman", serif;
}

body.screate-themed {
  /* Map existing page-local variable names onto the shared palette. */
  --bg: var(--screate-paper);
  --paper: var(--screate-paper);
  --panel: var(--screate-panel);
  --fg: var(--screate-ink);
  --ink: var(--screate-ink);
  --muted: var(--screate-muted);
  --border: var(--screate-line);
  --line: var(--screate-line);
  --teal: var(--screate-accent);
  --teal-dark: var(--screate-accent-dark);
  --teal-soft: var(--screate-accent-soft);
  --soft: var(--screate-accent-soft);

  color: var(--screate-ink);
  background-color: var(--screate-paper);
  font-family: var(--screate-font-sans);
  color-scheme: light;
}

/* Landing, Browse, Information, and About share the same visual shell. */
body.screate-site-page {
  min-height: 100%;
  color: var(--screate-ink);
  background:
    radial-gradient(circle at 78% 7%, rgba(8, 111, 105, 0.065), transparent 30rem),
    var(--screate-paper);
}

body.screate-site-page #top {
  min-height: 54px;
  gap: 8px;
  padding: 7px 12px;
  flex-wrap: nowrap;
  overflow: hidden;
  color: var(--screate-ink);
  background: rgba(255, 254, 251, 0.97);
  border-bottom-color: var(--screate-line);
  box-shadow: 0 1px 0 rgba(23, 35, 33, 0.02);
  font-family: var(--screate-font-sans);
}

body.screate-site-page #top > .tabs {
  min-width: 0;
  flex: 0 1 auto;
  flex-wrap: nowrap;
  overflow-x: auto;
  overflow-y: hidden;
  scrollbar-width: thin;
}

body.screate-site-page #top > #title,
body.screate-site-page #top > .divider,
body.screate-site-page #top > button {
  flex: 0 0 auto;
}

body.screate-site-page #title {
  color: var(--screate-accent-dark);
  font-size: 15px;
  font-weight: 800 !important;
  letter-spacing: 0.035em;
}

body.screate-site-page #top .divider {
  background: var(--screate-line);
}

body.screate-site-page #top .tablink {
  box-sizing: border-box;
  display: inline-flex;
  align-items: center;
  justify-content: center;
  min-height: 32px;
  padding: 5px 9px;
  color: var(--screate-muted);
  background: transparent;
  border: 1px solid transparent;
  border-radius: 6px;
  font-family: var(--screate-font-sans);
  font-size: 12px;
  font-weight: 650;
  line-height: 1.2;
  white-space: nowrap;
}

body.screate-site-page #top .tablink:hover,
body.screate-site-page #top .tablink:focus-visible {
  color: var(--screate-accent-dark);
  background: var(--screate-accent-soft);
  border-color: rgba(8, 111, 105, 0.2);
  outline: none;
}

body.screate-site-page #top .tablink.active {
  color: #fff;
  background: var(--screate-accent);
  border-color: var(--screate-accent);
}

body.screate-site-page #top .top-nav-group,
body.screate-site-page #top .top-nav-subnav {
  display: inline-flex;
  align-items: center;
  flex: 0 0 auto;
  gap: 3px;
}

body.screate-site-page #top .top-nav-group.expanded {
  padding: 2px;
  color: #fff;
  background: var(--screate-accent);
  border: 1px solid var(--screate-accent);
  border-radius: 8px;
}

body.screate-site-page #top .top-nav-group.expanded > .tablink.active {
  background: transparent;
  border-color: transparent;
}

body.screate-site-page #top .top-nav-subtab {
  box-sizing: border-box;
  display: inline-flex;
  align-items: center;
  justify-content: center;
  min-height: 28px;
  padding: 4px 8px;
  color: #fff;
  background: rgba(255, 255, 255, 0.1);
  border: 1px solid rgba(255, 255, 255, 0.42);
  border-radius: 5px;
  font-family: var(--screate-font-sans);
  font-size: 11px;
  font-weight: 700;
  line-height: 1.2;
  text-decoration: none;
  white-space: nowrap;
}

body.screate-site-page #top .top-nav-subtab:hover,
body.screate-site-page #top .top-nav-subtab:focus-visible {
  color: var(--screate-accent-dark);
  background: var(--screate-panel);
  border-color: var(--screate-panel);
  outline: none;
}

body.screate-site-page #top .top-nav-subtab.active,
body.screate-site-page #top .top-nav-subtab[aria-current="page"] {
  color: var(--screate-accent-dark);
  background: #fff;
  border-color: #fff;
  pointer-events: none;
}

body.screate-site-page #top .top-nav-subnav[hidden],
body.screate-site-page #top #traitComparisonTab[hidden] {
  display: none;
}

body.screate-site-page #top button,
body.screate-site-page .linkbtn,
body.screate-site-page .subtablink,
body.screate-site-page .dt-controls button {
  color: var(--screate-accent-dark);
  background: var(--screate-panel);
  border: 1px solid var(--screate-control-line);
  border-radius: 6px;
  font-family: var(--screate-font-sans);
}

body.screate-site-page .linkbtn {
  display: inline-flex;
  align-items: center;
  min-height: 34px;
  padding: 6px 10px;
  font-size: 13px;
  font-weight: 700;
  text-decoration: none;
}

body.screate-site-page #top button:hover,
body.screate-site-page .linkbtn:hover,
body.screate-site-page .subtablink:hover,
body.screate-site-page .dt-controls button:hover {
  color: var(--screate-accent-dark);
  background: var(--screate-accent-soft);
  border-color: var(--screate-accent);
}

body.screate-site-page #top button:disabled,
body.screate-site-page #top button:disabled:hover {
  color: var(--screate-muted);
  background: var(--screate-panel);
  border-color: var(--screate-control-line);
  opacity: 0.52;
  cursor: not-allowed;
}

body.screate-site-page .subtablink.active {
  color: #fff;
  background: var(--screate-accent);
  border-color: var(--screate-accent);
}

body.screate-site-page .page {
  max-width: 1180px;
}

body.screate-site-page .card {
  color: var(--screate-ink);
  background: rgba(255, 254, 251, 0.96);
  border-color: var(--screate-line);
  box-shadow: var(--screate-shadow);
}

body.screate-site-page h1,
body.screate-site-page h2 {
  color: var(--screate-ink);
  font-family: var(--screate-font-display);
  font-weight: 500;
}

body.screate-site-page h3 {
  color: var(--screate-accent-dark);
}

body.screate-site-page .hr {
  background: var(--screate-line);
}

body.screate-site-page input[type="text"],
body.screate-site-page select {
  color: var(--screate-ink);
  background: var(--screate-panel);
  border-color: var(--screate-control-line);
  border-radius: 6px;
  font-family: var(--screate-font-sans);
}

body.screate-site-page input[type="text"]:focus,
body.screate-site-page select:focus {
  border-color: var(--screate-accent);
  outline: 2px solid rgba(8, 111, 105, 0.12);
  outline-offset: 0;
}

body.screate-site-page #traitsTable,
body.screate-site-page #cellsTable,
body.screate-site-page #traitDataTable {
  background: var(--screate-panel);
  border-color: var(--screate-line);
}

/* Compact site navigation used by standalone SCREATE pages. */
.screate-site-header {
  position: relative;
  z-index: 1100;
  flex: 0 0 auto;
  min-height: 52px;
  display: flex;
  align-items: center;
  gap: 14px;
  flex-wrap: wrap;
  padding: 8px 14px;
  color: var(--screate-ink);
  background: rgba(255, 254, 251, 0.97);
  border: 0;
  border-bottom: 1px solid var(--screate-line);
  box-shadow: 0 1px 0 rgba(23, 35, 33, 0.02);
  font-family: var(--screate-font-sans);
}

.screate-site-brand {
  flex: 0 0 auto;
  color: var(--screate-accent-dark);
  font-size: 15px;
  font-weight: 800;
  letter-spacing: 0.035em;
  line-height: 1;
  text-decoration: none;
}

.screate-site-brand:hover,
.screate-site-brand:focus-visible {
  color: var(--screate-accent);
}

.screate-site-nav {
  min-width: 0;
  display: flex;
  align-items: center;
  gap: 6px;
  flex-wrap: wrap;
}

.screate-site-nav a,
.screate-nav-link {
  display: inline-flex;
  align-items: center;
  min-height: 32px;
  padding: 5px 9px;
  color: var(--screate-muted);
  background: transparent;
  border: 1px solid transparent;
  border-radius: 6px;
  font-family: var(--screate-font-sans);
  font-size: 12px;
  font-weight: 650;
  line-height: 1.2;
  text-decoration: none;
  white-space: nowrap;
}

.screate-site-nav a:hover,
.screate-site-nav a:focus-visible,
.screate-nav-link:hover,
.screate-nav-link:focus-visible {
  color: var(--screate-accent-dark);
  background: var(--screate-accent-soft);
  border-color: rgba(8, 111, 105, 0.2);
  outline: none;
}

.screate-site-nav a.active,
.screate-site-nav a[aria-current="page"],
.screate-nav-link.active,
.screate-nav-link[aria-current="page"] {
  color: #fff;
  background: var(--screate-accent);
  border-color: var(--screate-accent);
}

/*
 * Catalogue and UMAP are full-height applications. Flexing their existing
 * .app element into the space below a wrapping site header avoids clipping.
 */
body.screate-shell-page {
  height: 100%;
  min-height: 100%;
  display: flex;
  flex-direction: column;
}

body.screate-shell-page > .app {
  height: auto;
  min-height: 0;
  flex: 1 1 auto;
}

html.screate-embedded .screate-site-header {
  display: none;
}

body.screate-umap-page .panel {
  border-color: var(--screate-line);
  background: var(--screate-panel);
  box-shadow: var(--screate-shadow);
}

body.screate-umap-page select,
body.screate-umap-page input {
  border-color: var(--screate-control-line);
}

body.screate-umap-page select:focus,
body.screate-umap-page input:focus {
  border-color: var(--screate-accent);
  outline: 2px solid rgba(8, 111, 105, 0.12);
  outline-offset: 0;
}

/* Primary heatmap documents, displayed inside the Heatmaps hub. */
body.screate-plot-page {
  background: var(--screate-paper);
  color: var(--screate-ink);
}

body.screate-plot-page .header {
  color: var(--screate-ink);
  background: var(--screate-panel);
  border-bottom-color: var(--screate-line);
  box-shadow: 0 1px 0 rgba(23, 35, 33, 0.02);
}

body.screate-plot-page .header h1 {
  color: var(--screate-ink);
  font-family: var(--screate-font-display);
  font-size: 18px;
  font-weight: 500;
}

body.screate-plot-page .control-group label {
  color: var(--screate-muted);
  font-weight: 650;
}

body.screate-plot-page .control-group select,
body.screate-plot-page .control-group input[type="range"],
body.screate-plot-page .cat-btn,
body.screate-plot-page .reset-btn {
  color: var(--screate-ink);
  background: var(--screate-panel);
  border-color: var(--screate-control-line);
  font-family: var(--screate-font-sans);
}

body.screate-plot-page .control-group select:focus,
body.screate-plot-page .cat-btn:focus-visible,
body.screate-plot-page .reset-btn:focus-visible {
  border-color: var(--screate-accent);
  outline: 2px solid rgba(8, 111, 105, 0.13);
  outline-offset: 1px;
}

body.screate-plot-page .control-group input[type="range"],
body.screate-plot-page .cat-item input {
  accent-color: var(--screate-accent);
}

body.screate-plot-page .val-display,
body.screate-plot-page .cat-actions a {
  color: var(--screate-accent);
}

body.screate-plot-page .cat-btn:hover,
body.screate-plot-page .reset-btn:hover {
  color: var(--screate-accent-dark);
  border-color: var(--screate-accent);
}

body.screate-plot-page .stats,
body.screate-plot-page #loading,
body.screate-plot-page .cat-count {
  color: var(--screate-muted);
}

body.screate-plot-page .cat-panel {
  color: var(--screate-ink);
  background: var(--screate-panel);
  border-color: var(--screate-control-line);
  box-shadow: 0 8px 24px rgba(23, 35, 33, 0.14);
}

body.screate-plot-page .cat-actions {
  border-bottom-color: var(--screate-line);
}

body.screate-plot-page .cat-item {
  color: var(--screate-ink);
}

/* Contextual Catalogue heatmaps already share this structure and palette. */
body.screate-context-heatmap .head {
  color: var(--screate-ink);
  background: rgba(255, 254, 251, 0.97);
  border-bottom-color: var(--screate-line);
}

body.screate-context-heatmap .tab,
body.screate-context-heatmap .find-button,
body.screate-context-heatmap .order-button,
body.screate-context-heatmap .legend-button,
body.screate-context-heatmap .search {
  color: var(--screate-accent-dark);
  background: var(--screate-panel);
  border-color: var(--screate-control-line);
}

body.screate-context-heatmap .tab:hover,
body.screate-context-heatmap .find-button:hover,
body.screate-context-heatmap .order-button:hover,
body.screate-context-heatmap .legend-button:hover {
  border-color: var(--screate-accent);
}

body.screate-context-heatmap .tab.active,
body.screate-context-heatmap .order-button.active {
  color: #fff;
  background: var(--screate-accent);
  border-color: var(--screate-accent);
}

body.screate-context-heatmap .search:focus {
  border-color: var(--screate-accent);
  outline: 2px solid rgba(8, 111, 105, 0.13);
  outline-offset: 1px;
}

/*
 * Traits and Heatmaps are application views rather than scrolling documents.
 * Let the active section consume exactly the space left below the wrapping
 * main navigation, including at widths where that navigation becomes taller.
 */
body.screate-site-page.screate-framed-view {
  width: 100%;
  height: 100vh;
  height: 100dvh;
  min-height: 0;
  display: flex;
  flex-direction: column;
  overflow: hidden;
}

body.screate-site-page.screate-framed-view #top {
  position: relative;
  flex: 0 0 auto;
}

body.screate-site-page.screate-framed-view > .page-section.active {
  min-height: 0;
  flex: 1 1 auto;
  overflow: hidden;
}

/* Grouped iframe hubs used by index.html for trait views and heatmaps. */
.screate-view-hub,
.screate-heatmap-hub {
  width: 100%;
  height: 100%;
  min-height: 0;
  display: flex;
  flex-direction: column;
  color: var(--screate-ink);
  background: var(--screate-paper);
}

.screate-view-hub-head,
.screate-heatmap-hub-head {
  flex: 0 0 auto;
  display: flex;
  align-items: center;
  gap: 12px;
  flex-wrap: wrap;
  padding: 10px 14px;
  background: var(--screate-panel);
  border-bottom: 1px solid var(--screate-line);
}

.screate-view-hub-head h2,
.screate-heatmap-hub-head h2 {
  margin: 1px 0 0;
  color: var(--screate-ink);
  font-family: var(--screate-font-display);
  font-size: 22px;
  font-weight: 500;
}

.screate-eyebrow {
  margin: 0;
  color: var(--screate-accent);
  font-size: 10px;
  font-weight: 800;
  letter-spacing: 0.12em;
  text-transform: uppercase;
}

.screate-view-tabs,
.screate-heatmap-tabs {
  display: flex;
  align-items: center;
  gap: 7px;
  flex-wrap: wrap;
}

.screate-view-tab,
.screate-heatmap-tab {
  display: inline-flex;
  align-items: center;
  min-height: 32px;
  padding: 5px 10px;
  color: var(--screate-accent-dark);
  background: var(--screate-panel);
  border: 1px solid var(--screate-control-line);
  border-radius: 6px;
  cursor: pointer;
  font-family: var(--screate-font-sans);
  font-size: 12px;
  font-weight: 650;
  line-height: 1.2;
  text-decoration: none;
}

.screate-view-tab:hover,
.screate-view-tab:focus-visible,
.screate-heatmap-tab:hover,
.screate-heatmap-tab:focus-visible {
  color: var(--screate-accent-dark);
  background: var(--screate-accent-soft);
  border-color: var(--screate-accent);
  outline: none;
}

.screate-view-tab.active,
.screate-view-tab[aria-current="page"],
.screate-heatmap-tab.active,
.screate-heatmap-tab[aria-current="page"] {
  color: #fff;
  background: var(--screate-accent);
  border-color: var(--screate-accent);
}

.screate-view-frame-wrap,
.screate-heatmap-frame-wrap {
  position: relative;
  min-width: 0;
  min-height: 0;
  flex: 1 1 auto;
  overflow: hidden;
  background: var(--screate-panel);
}

.screate-view-frame,
.screate-heatmap-frame {
  position: absolute;
  inset: 0;
  display: block;
  width: 100%;
  height: 100%;
  min-height: 0;
  border: 0;
  background: var(--screate-panel);
}

.screate-view-frame[hidden] {
  display: none;
}

@media (max-width: 760px) {
  .screate-site-header {
    align-items: flex-start;
    gap: 7px 12px;
    padding: 8px 10px;
  }

  .screate-site-nav {
    gap: 4px;
  }

  .screate-site-nav a,
  .screate-nav-link {
    min-height: 29px;
    padding: 4px 7px;
    font-size: 11px;
  }

  body.screate-shell-page {
    height: auto;
    min-height: 100%;
  }

  body.screate-shell-page > .app {
    min-height: 100vh;
    min-height: 100dvh;
    flex: 0 0 auto;
  }

  .screate-view-hub-head,
  .screate-heatmap-hub-head {
    padding: 8px 10px;
  }
}